RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 H2AFB1P0C5Y9 115 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 H2AFB2P0C5Z0 115 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 DRD2P14416 443 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 ATF3P18847 181 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 BMP6P22004 513 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 SULF2Q8IWU5 870 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 WDR89Q96FK6 387 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 CCDC86Q9H6F5 360 aaKnown RBP6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 DISP2A7MBM2 1401 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 NUP188Q5SRE5 1749 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 SHANK3Q9BYB0 1731 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ZNF862O60290 1169 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ADAM23O75077 832 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 CELA3AP09093 270 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 GSTP1P09211 210 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 NME2P22392 152 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ARNTP27540 789 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ITGAEP38570 1179 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ZNF252P-AS1Q0IIN9 211 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 UVSSAQ2YD98 709 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 RASIP1Q5U651 963 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 PRR23CQ6ZRP0 262 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 C12orf50Q8NA57 414 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 PLCD4Q9BRC7 762 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 CEP44Q9C0F1 390 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 CYP4F12Q9HCS2 524 aa6.84□□□□□ -1.31
ECHDC1-204ENST00000368292 DCCP43146 1447 aa6.84□□□□□ -1.32
ECHDC1-204ENST00000368292 RREB1Q92766 1687 aa6.84□□□□□ -1.32
ECHDC1-204ENST00000368292 ADGRB3O60242 1522 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 AOC2O75106 756 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 LIG1P18858 919 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 SOX4Q06945 474 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 MEI1Q5TIA1 1274 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 C2CD4AQ8NCU7 369 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 GRIN3AQ8TCU5 1115 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 MYRFLQ96LU7 910 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 WDR18Q9BV38 432 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 SEMA6BQ9H3T3 888 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 METTL5Q9NRN9 209 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 CACNA2D2Q9NY47 1150 aa6.83□□□□□ -1.32
ECHDC1-204ENST00000368292 NRKQ7Z2Y5 1582 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 SYNGAP1Q96PV0 1343 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 SLIT2O94813 1529 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 MYOM1P52179 1685 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 ADH5P11766 374 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 PTMSP20962 102 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 EZH2Q15910 746 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 SV2BQ7L1I2 683 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 FAM20CQ8IXL6 584 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 RNF34Q969K3 372 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 UTP4Q969X6 686 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 PCDHGC5Q9Y5F6 944 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 MYO5BQ9ULV0 1848 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
ECHDC1-204ENST00000368292 TRPM2O94759 1503 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 DHX15O43143 795 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 SART1O43290 800 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 ZNF76P36508 570 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 PRELPP51888 382 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 PDE3AQ14432 1141 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 KIF4BQ2VIQ3 1234 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 GSX1Q9H4S2 264 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 PPP1R9AQ9ULJ8 1098 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 RAXQ9Y2V3 346 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 ZFYVE9O95405 1425 aa6.81□□□□□ -1.32
ECHDC1-204ENST00000368292 BMP3P12645 472 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 TAF1CQ15572 869 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 ARHGAP31Q2M1Z3 1444 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 NAALADL2Q58DX5 795 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 MAP1SQ66K74 1059 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 ADAMTS13Q76LX8 1427 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 KRT27Q7Z3Y8 459 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 PTPRUQ92729 1446 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 KCNB2Q92953 911 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 RAD18Q9NS91 495 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 CFDP1Q9UEE9 299 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 PLEKHG1Q9ULL1 1385 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 CASZ1Q86V15 1759 aa6.8□□□□□ -1.32
ECHDC1-204ENST00000368292 EIF2AK4Q9P2K8 1649 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 NALCNQ8IZF0 1738 aa6.79□□□□□ -1.32
ECHDC1-204ENST00000368292 ST13P50502 369 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms