RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 KIDINS220Q9ULH0 1771 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 CYP27B1O15528 508 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
COPA-202ENST00000368069 VAV2P52735 878 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 DNAJC21Q5F1R6 531 aaKnown RBP13.1□□□□□ -0.31
COPA-202ENST00000368069 CCDC65Q8IXS2 484 aa13.1□□□□□ -0.31
COPA-202ENST00000368069 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPA-202ENST00000368069 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 CABP7Q86V35 215 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 IKBKBO14920 756 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 ARPP21Q9UBL0 812 aaPredicted RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 KRT13P13646 458 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 FAM13AO94988 1023 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 ERCC3P19447 782 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 OAS2P29728 719 aaKnown RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 RPS8P62241 208 aaKnown RBP13.09□□□□□ -0.31
COPA-202ENST00000368069 MORC3Q14149 939 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 TGFBRAP1Q8WUH2 860 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 CCDC51Q96ER9 411 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 CSRNP2Q9H175 543 aa13.09□□□□□ -0.31
COPA-202ENST00000368069 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.31
COPA-202ENST00000368069 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.31
COPA-202ENST00000368069 DDIT3P35638 169 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
COPA-202ENST00000368069 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
COPA-202ENST00000368069 SECISBP2LQ93073 1101 aaKnown RBP13.08□□□□□ -0.32
COPA-202ENST00000368069 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
COPA-202ENST00000368069 BLIDQ8IZY5 108 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 LMBR1Q8WVP7 490 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 GJB4Q9NTQ9 266 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 PRKAB2O43741 272 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 TRAF1Q13077 416 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 NLRP10Q86W26 655 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.32
COPA-202ENST00000368069 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
COPA-202ENST00000368069 SCG2P13521 617 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 PTGDRQ13258 359 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 IL25Q9H293 177 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 GRAMD1CQ8IYS0 662 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
COPA-202ENST00000368069 ADCY7P51828 1080 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 SEC31BQ9NQW1 1179 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 EFCAB8A8MWE9 144 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 NR5A1Q13285 461 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 PPP4R3AQ6IN85 833 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.321e-6■■■□□ 16.8
COPA-202ENST00000368069 LZTS2Q9BRK4 669 aa13.07□□□□□ -0.32
COPA-202ENST00000368069 STX10O60499 249 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 TNNC1P63316 161 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 GOLPH3LQ9H4A5 285 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 SMC1AQ14683 1233 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 CALCRLQ16602 461 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 INF2Q27J81 1249 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 LCORLQ8N3X6 602 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 PNMA1Q8ND90 353 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 NAP1L4Q99733 375 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 DDAH1O94760 285 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
COPA-202ENST00000368069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPA-202ENST00000368069 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 ZEB2O60315 1214 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 COBLO75128 1261 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 MMP1P03956 469 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 C8orf74Q6P047 294 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 PSMB7Q99436 277 aa13.06□□□□□ -0.32
COPA-202ENST00000368069 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms