RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 DPF2Q92785 391 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 TCHHQ07283 1943 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 SHC4Q6S5L8 630 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.04■□□□□ 0.16
PARP1-203ENST00000366794 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 SYNRGQ9UMZ2 1314 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 ARHGAP23Q9P227 1491 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 GPS2Q13227 327 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
PARP1-203ENST00000366794 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 SLF1Q9BQI6 1058 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
PARP1-203ENST00000366794 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
PARP1-203ENST00000366794 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.16
PARP1-203ENST00000366794 CACNB3P54284 484 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 FBXO3Q9UK99 471 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 NRXN3Q9Y4C0 1643 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 FAM196BA6NMK8 535 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 KIF2AO00139 706 aaPredicted RBP16.03■□□□□ 0.16
PARP1-203ENST00000366794 CPDO75976 1380 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 TRIM37O94972 964 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 MMP1P03956 469 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 KIAA0825Q8IV33 1275 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 EPC1Q9H2F5 836 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
PARP1-203ENST00000366794 IFNAR1P17181 557 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 PTPROQ16827 1216 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 FCHSD1Q86WN1 690 aa16.03■□□□□ 0.16
PARP1-203ENST00000366794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.02■□□□□ 0.16
PARP1-203ENST00000366794 PDE4DQ08499 809 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 CCDC70Q6NSX1 233 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
PARP1-203ENST00000366794 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 A0A1W2PQ27 194 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 A0A1W2PQ64 194 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 A0A1W2PQD8 194 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
PARP1-203ENST00000366794 CSF1RP07333 972 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 CALM1P0DP23 149 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 CALM2P0DP24 149 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 CALM3P0DP25 149 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 TECP42680 631 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 EVCP57679 992 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 PLS1Q14651 629 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.16
PARP1-203ENST00000366794 EYA3Q99504 573 aa16.02■□□□□ 0.16
PARP1-203ENST00000366794 MACROD2A1Z1Q3 448 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 PP2D1A8MPX8 630 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 AKR1B10O60218 316 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 KRT9P35527 623 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.15
PARP1-203ENST00000366794 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 MST1RQ04912 1400 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 AKR1B15C9JRZ8 316 aaPredicted RBP16.02■□□□□ 0.15
PARP1-203ENST00000366794 KLRF2D3W0D1 207 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 PSMA7O14818 248 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 SLC16A2P36021 539 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 TAF3Q5VWG9 929 aa16.02■□□□□ 0.15
PARP1-203ENST00000366794 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.15
PARP1-203ENST00000366794 FER1L4A9Z1Z3 1794 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 CCDC175P0C221 793 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 SCG2P13521 617 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 CALML3P27482 149 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 BTDP43251 543 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 USH1GQ495M9 461 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
PARP1-203ENST00000366794 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
PARP1-203ENST00000366794 UBE4AQ14139 1066 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 VEZTQ9HBM0 779 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 EVX2Q03828 476 aa16.01■□□□□ 0.15
PARP1-203ENST00000366794 FAM84BQ96KN1 310 aaPredicted RBP16.01■□□□□ 0.15
PARP1-203ENST00000366794 SLIT1O75093 1534 aa16■□□□□ 0.15
PARP1-203ENST00000366794 GSTO1P78417 241 aa16■□□□□ 0.15
PARP1-203ENST00000366794 SPA17Q15506 151 aa16■□□□□ 0.15
PARP1-203ENST00000366794 C6orf50Q9HD87 102 aa16■□□□□ 0.15
PARP1-203ENST00000366794 MROH7-TTC4A0A0A0MT08 1334 aa16■□□□□ 0.15
PARP1-203ENST00000366794 NELFCDQ8IXH7 590 aa16■□□□□ 0.15
PARP1-203ENST00000366794 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
PARP1-203ENST00000366794 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
PARP1-203ENST00000366794 NELFBQ8WX92 580 aa16■□□□□ 0.15
PARP1-203ENST00000366794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■■■■ 168.3
PARP1-203ENST00000366794 SMCO2A6NFE2 343 aa16■□□□□ 0.15
PARP1-203ENST00000366794 IQCB1Q15051 598 aa16■□□□□ 0.15
PARP1-203ENST00000366794 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
PARP1-203ENST00000366794 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
PARP1-203ENST00000366794 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
PARP1-203ENST00000366794 RBM28Q9NW13 759 aaKnown RBP16■□□□□ 0.15
PARP1-203ENST00000366794 TTF2Q9UNY4 1162 aaKnown RBP16■□□□□ 0.15
PARP1-203ENST00000366794 ZFYVE27Q5T4F4 411 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms