RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 PARP3Q9Y6F1 533 aa17.74■□□□□ 0.43
CNKSR1-201ENST00000361530 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
CNKSR1-201ENST00000361530 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
CNKSR1-201ENST00000361530 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 ZSCAN12O43309 604 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 CD44P16070 742 aaKnown RBP17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 PLCD1P51178 756 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 SIK1P57059 783 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 AKAP17AQ02040 695 aaKnown RBP17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 NR1I3Q14994 352 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 TERF2Q15554 542 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 KANK3Q6NY19 840 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 ZFP91Q96JP5 570 aaPredicted RBP17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 DACH1Q9UI36 760 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 WDR24Q96S15 920 aa17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 AATFQ9NY61 560 aaKnown RBP eCLIP17.73■□□□□ 0.43
CNKSR1-201ENST00000361530 TEX33O43247 280 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 STX10O60499 249 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 CLCN6P51797 869 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 TAF3Q5VWG9 929 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 APTXQ7Z2E3 356 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 CARD6Q9BX69 1037 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 PLCH1Q4KWH8 1693 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 PRPF3O43395 683 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 KRT2P35908 639 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 STX17P56962 302 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 TROAPQ12815 778 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 KLHL10Q6JEL2 608 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 PAGE5Q96GU1 130 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 DOT1LQ8TEK3 1739 aa17.72■□□□□ 0.43
CNKSR1-201ENST00000361530 ZNF174Q15697 407 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 NPY5RQ15761 445 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 DESI2Q9BSY9 194 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 MYH6P13533 1939 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 ERICH4A6NGS2 130 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 MTF1Q14872 753 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 PPP2R5BQ15173 497 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 SH3RF1Q7Z6J0 888 aa17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 SMYD4Q8IYR2 804 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-201ENST00000361530 A0A1B0GTH6 734 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 XBP1P17861 261 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 GNG11P61952 73 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 UBXN4Q92575 508 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 VGLL3A8MV65 326 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 TADA3O75528 432 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 CUL4BQ13620 913 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 CTR9Q6PD62 1173 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 STAMQ92783 540 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 TNFRSF25Q93038 417 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 CDC5LQ99459 802 aaKnown RBP17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 PHLPP1O60346 1717 aa17.7■□□□□ 0.42
CNKSR1-201ENST00000361530 NMT2O60551 498 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 BRD2P25440 801 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 MNS1Q8NEH6 495 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 FAM84BQ96KN1 310 aaPredicted RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 EPC1Q9H2F5 836 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 FHOD1Q9Y613 1164 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 TAF1P21675 1872 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 BAZ2BQ9UIF8 2168 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 USP17L21D6R901 530 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 ADAMTS3O15072 1205 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 VEGFAP15692 232 aaPredicted RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 NOL10Q9BSC4 688 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 GNL3LQ9NVN8 582 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 COL14A1Q05707 1796 aaKnown RBP17.69■□□□□ 0.42
CNKSR1-201ENST00000361530 COBLO75128 1261 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 DPYDQ12882 1025 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 DDB1Q16531 1140 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 SPATA1Q5VX52 437 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 SRBD1Q8N5C6 995 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 BRIP1Q9BX63 1249 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 FGRP09769 529 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 KLRK1P26718 216 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 UBE4AQ14139 1066 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 IQCA1Q86XH1 822 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 IRX2Q9BZI1 471 aaPredicted RBP17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 DUOX1Q9NRD9 1551 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 SOWAHDA6NJG2 315 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 PPP1R3GB7ZBB8 358 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 CASQ1P31415 396 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 PTGDRQ13258 359 aa17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
CNKSR1-201ENST00000361530 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms