RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 NME9Q86XW9 330 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TMC2Q8TDI7 906 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TCEANC2Q96MN5 208 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CSRNP2Q9H175 543 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 RABEP2Q9H5N1 569 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CTNND2Q9UQB3 1225 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CALUO43852 315 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 RAP1GDS1P52306 607 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 MCM6Q14566 821 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 STX1AQ16623 288 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 ZC3H12BQ5HYM0 836 aaKnown RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 KAZNQ674X7 775 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 NECAB1Q8N987 351 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 NLRP7Q8WX94 980 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 PPP1R14AQ96A00 147 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 HAUS8Q9BT25 410 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 PCDHB13Q9Y5F0 798 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TOP2BQ02880 1626 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 IRS4O14654 1257 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TXKP42681 527 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 GNAQP50148 359 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 RUFY3Q7L099 469 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 NLRX1Q86UT6 975 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 DPF3Q92784 378 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 SH3KBP1Q96B97 665 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 RAD50Q92878 1312 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 CFTRP13569 1480 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 PRPF4O43172 522 aaKnown RBP eCLIP6.41□□□□□ -1.385e-17■■■■■ 29.7
BRCA1-203ENST00000357654 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-203ENST00000357654 BRD1O95696 1058 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 GOLGA8FQ08AF8 430 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 GOLGA8DPQ0D2H9 430 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 SUPT20HQ8NEM7 779 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 DISC1Q9NRI5 854 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 RTEL1Q9NZ71 1219 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 ASIC3Q9UHC3 531 aa6.41□□□□□ -1.38
BRCA1-203ENST00000357654 TNNC2P02585 160 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 MYBP10242 640 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 KCNA1Q09470 495 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 DPYDQ12882 1025 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 PABPC4Q13310 644 aaKnown RBP eCLIP6.4□□□□□ -1.383e-11■■□□□ 12.7
BRCA1-203ENST00000357654 PRPSAP1Q14558 356 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 PTPROQ16827 1216 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 HHATQ5VTY9 493 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 KHDRBS2Q5VWX1 349 aaKnown RBP6.4□□□□□ -1.38
BRCA1-203ENST00000357654 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 TTC6Q86TZ1 520 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 HELLSQ9NRZ9 838 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 AATFQ9NY61 560 aaKnown RBP eCLIP6.4□□□□□ -1.38
BRCA1-203ENST00000357654 MAPK8IP1Q9UQF2 711 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 RSPH10B2B2RC85 870 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 RSPH10BP0C881 870 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 ZNF853P0CG23 659 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 SCNN1DP51172 638 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 FAM117BQ6P1L5 589 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 DTHD1Q6ZMT9 781 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 TRIML1Q8N9V2 468 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 EHBP1Q8NDI1 1231 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 MCUR1Q96AQ8 359 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 TRIM55Q9BYV6 548 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 AFF4Q9UHB7 1163 aaKnown RBP6.4□□□□□ -1.38
BRCA1-203ENST00000357654 TRIM35Q9UPQ4 493 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
BRCA1-203ENST00000357654 PDE6BP35913 854 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 RARSP54136 660 aaKnown RBP6.4□□□□□ -1.38
BRCA1-203ENST00000357654 TAOK1Q7L7X3 1001 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 C2CD5Q86YS7 1000 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 NELFCDQ8IXH7 590 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 SNX19Q92543 992 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 ANKRD2Q9GZV1 360 aa6.4□□□□□ -1.38
BRCA1-203ENST00000357654 ARHGAP42A6NI28 874 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 RHOXF2BP0C7M4 288 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 KRT10P13645 584 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 HADHAP40939 763 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 OCRLQ01968 901 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 SV2BQ7L1I2 683 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 SDCCAG3Q96C92 435 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC42Q96M95 316 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 RHOXF2Q9BQY4 288 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 TSPYL2Q9H2G4 693 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 MRPL44Q9H9J2 332 aaKnown RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 ATG3Q9NT62 314 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 CCPG1Q9ULG6 757 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 THRAP3Q9Y2W1 955 aaKnown RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 ERBB3P21860 1342 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 ZNF644Q9H582 1327 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 SCAPERQ9BY12 1400 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 WDR7Q9Y4E6 1490 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 CCDC62Q6P9F0 684 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 DYMQ7RTS9 669 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 RGL1Q9NZL6 768 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 CLRN2A0PK11 232 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 POTEB2H3BUK9 544 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 DIAPH2O60879 1101 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 RPL13P26373 211 aaKnown RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 LIG4P49917 911 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 ZBTB8OSQ8IWT0 167 aa6.4□□□□□ -1.39
BRCA1-203ENST00000357654 C1orf131Q8NDD1 294 aaKnown RBP6.4□□□□□ -1.39
BRCA1-203ENST00000357654 C6orf203Q9P0P8 240 aaPredicted RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms