RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 IL16Q14005 1332 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 FLOT1O75955 427 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 GDF11O95390 407 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 SYN1P17600 705 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 GTF2A2P52657 109 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 NFKBIBQ15653 356 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 Q3C1V9 767 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 SYNE3Q6ZMZ3 975 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 TBC1D9Q6ZT07 1266 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 SPICE1Q8N0Z3 855 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 ANKRD13CQ8N6S4 541 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 ZDHHC16Q969W1 377 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 BOLA2Q9H3K6 86 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 ZNF287Q9HBT7 754 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 MINPP1Q9UNW1 487 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 BAZ2AQ9UIF9 1905 aaKnown RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 TTC28Q96AY4 2481 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 RGS3P49796 1198 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 PRELPP51888 382 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 GCKRQ14397 625 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 KCTD2Q14681 263 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 PUM3Q15397 648 aaKnown RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 MFSD14CQ5VZR4 134 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 TTC6Q86TZ1 520 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 MRPL50Q8N5N7 158 aaKnown RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 GCC1Q96CN9 775 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 DDX27Q96GQ7 796 aaKnown RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 CHAMP1Q96JM3 812 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 NCOR1O75376 2440 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 KBTBD13C9JR72 458 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 ANKRD45Q5TZF3 282 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 C7orf61Q8IZ16 206 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 AGBL3Q8NEM8 1001 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 PSMD1Q99460 953 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 MPHOSPH6Q99547 160 aaKnown RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 HCSTQ9UBK5 93 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 POLLQ9UGP5 575 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 COL4A4P53420 1690 aaPredicted RBP4.5□□□□□ -1.69
SMC1B-201ENST00000357450 MYH8P13535 1937 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 KIF16BQ96L93 1317 aa4.5□□□□□ -1.69
SMC1B-201ENST00000357450 GOLIM4O00461 696 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 FARP2O94887 1054 aaPredicted RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 HMGCS2P54868 508 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 NUCB1Q02818 461 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 CSPP1Q1MSJ5 1256 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 FAM117BQ6P1L5 589 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 EEPD1Q7L9B9 569 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 RALYLQ86SE5 291 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 DZIP1LQ8IYY4 767 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 ANKRD35Q8N283 1001 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 ZC3H15Q8WU90 426 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 ZNF296Q8WUU4 475 aaPredicted RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 PANK2Q9BZ23 570 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 MTIF3Q9H2K0 278 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 BICC1Q9H694 974 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 TNS1Q9HBL0 1735 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 LAMA1P25391 3075 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 STRIP1Q5VSL9 837 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 DPF2Q92785 391 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 CLMNQ96JQ2 1002 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 UBE2OQ9C0C9 1292 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 TSPY2A6NKD2 308 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 UQCRFS1P1P0C7P4 283 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 XRCC6P12956 609 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 BTDP43251 543 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 FASTKD5Q7L8L6 764 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 PUS3Q9BZE2 481 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 NAPBQ9H115 298 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 ARHGEF10LQ9HCE6 1279 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 BSDC1Q9NW68 430 aaPredicted RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 NOP58Q9Y2X3 529 aaKnown RBP4.49□□□□□ -1.69
SMC1B-201ENST00000357450 IRS2Q9Y4H2 1338 aa4.49□□□□□ -1.69
SMC1B-201ENST00000357450 NEURL1BA8MQ27 555 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ADCY3O60266 1144 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ZKSCAN1P17029 563 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 INHBEP58166 350 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 SAPCD2Q86UD0 394 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 WDR63Q8IWG1 891 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 MICAL1Q8TDZ2 1067 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 SLKQ9H2G2 1235 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 SH2D4AQ9H788 454 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 CDHR5Q9HBB8 845 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 NAV1Q8NEY1 1877 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 RP1L1Q8IWN7 2480 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 WNT10BO00744 389 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 NTSR2O95665 410 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 RAG1P15918 1043 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ZNF76P36508 570 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 IL15P40933 162 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 SLC9C2Q5TAH2 1124 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ZSCAN25Q6NSZ9 544 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 RASSF8Q8NHQ8 419 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 RNF186Q9NXI6 227 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 FNDC1Q4ZHG4 1894 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 PTPDC1A2A3K4 754 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ELNP15502 786 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 GRK4P32298 578 aa4.48□□□□□ -1.69
SMC1B-201ENST00000357450 SSTR3P32745 418 aaPredicted RBP4.48□□□□□ -1.69
SMC1B-201ENST00000357450 ERC1Q8IUD2 1116 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms