RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 TRAF5O00463 557 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 DTNBO60941 627 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 RXRAP19793 462 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 DCAF15Q66K64 600 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 SGMS1Q86VZ5 419 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 MTMR4Q9NYA4 1195 aa28.2■■■□□ 2.11
CHKA-202ENST00000356135 PLIN4Q96Q06 1357 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 CCDC69A6NI79 296 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 PDIA3P30101 505 aaKnown RBP28.19■■■□□ 2.1
CHKA-202ENST00000356135 CAP2P40123 477 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 EVCP57679 992 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 RAB3GAP1Q15042 981 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 LDHDQ86WU2 507 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 DGKHQ86XP1 1220 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 ZNF341Q9BYN7 854 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 INPP5BP32019 993 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 CABP5Q9NP86 173 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 FOXD4L1Q9NU39 408 aa28.19■■■□□ 2.1
CHKA-202ENST00000356135 CCT2P78371 535 aaKnown RBP28.18■■■□□ 2.1
CHKA-202ENST00000356135 ST3GAL1Q11201 340 aa28.18■■■□□ 2.1
CHKA-202ENST00000356135 TMEM179Q6ZVK1 233 aa28.18■■■□□ 2.1
CHKA-202ENST00000356135 CHMP4CQ96CF2 233 aa28.18■■■□□ 2.1
CHKA-202ENST00000356135 HOOK2Q96ED9 719 aa28.18■■■□□ 2.1
CHKA-202ENST00000356135 TMEM47Q9BQJ4 181 aa28.18■■■□□ 2.1
CHKA-202ENST00000356135 SLKQ9H2G2 1235 aaPredicted RBP28.18■■■□□ 2.1
CHKA-202ENST00000356135 USP2O75604 605 aaPredicted RBP28.17■■■□□ 2.1
CHKA-202ENST00000356135 ATP2B2Q01814 1243 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 APOA5Q6Q788 366 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 CCDC84Q86UT8 332 aaPredicted RBP28.17■■■□□ 2.1
CHKA-202ENST00000356135 TMTC2Q8N394 836 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 ANKS1AQ92625 1134 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 ZSCAN31Q96LW9 406 aaPredicted RBP28.17■■■□□ 2.1
CHKA-202ENST00000356135 CLIP2Q9UDT6 1046 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 ZBTB21Q9ULJ3 1066 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 SLC12A7Q9Y666 1083 aa28.17■■■□□ 2.1
CHKA-202ENST00000356135 NOVP48745 357 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 SIAH1Q8IUQ4 282 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 CCDC144CPQ8IYA2 1237 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 ZKSCAN4Q969J2 545 aaPredicted RBP28.16■■■□□ 2.1
CHKA-202ENST00000356135 ZNF274Q96GC6 653 aaPredicted RBP28.16■■■□□ 2.1
CHKA-202ENST00000356135 WRNIP1Q96S55 665 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 ZNF112Q9UJU3 913 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 HPS5Q9UPZ3 1129 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 GOLGA8BA8MQT2 603 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 CCDC178Q5BJE1 867 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 CCDC83Q8IWF9 413 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 KLRG1Q96E93 195 aa28.16■■■□□ 2.1
CHKA-202ENST00000356135 GPBP1L1Q9HC44 474 aaPredicted RBP28.16■■■□□ 2.1
CHKA-202ENST00000356135 NCOA5Q9HCD5 579 aaKnown RBP28.16■■■□□ 2.1
CHKA-202ENST00000356135 SCRN1Q12765 414 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 MOB2Q70IA6 237 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 MICU3Q86XE3 530 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 ZNF654Q8IZM8 581 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 KAT14Q9H8E8 782 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 MTMR7Q9Y216 660 aa28.15■■■□□ 2.1
CHKA-202ENST00000356135 GREB1LQ9C091 1923 aaPredicted RBP28.15■■■□□ 2.1
CHKA-202ENST00000356135 EEF2P13639 858 aaKnown RBP28.14■■■□□ 2.1
CHKA-202ENST00000356135 DDIT3P35638 169 aa28.14■■■□□ 2.1
CHKA-202ENST00000356135 LRRC47Q8N1G4 583 aaKnown RBP28.14■■■□□ 2.1
CHKA-202ENST00000356135 NUP133Q8WUM0 1156 aa28.14■■■□□ 2.1
CHKA-202ENST00000356135 KANSL2Q9H9L4 492 aa28.14■■■□□ 2.1
CHKA-202ENST00000356135 ZBTB43O43298 467 aa28.14■■■□□ 2.09
CHKA-202ENST00000356135 CTNND1O60716 968 aaKnown RBP28.14■■■□□ 2.09
CHKA-202ENST00000356135 PFKFB2O60825 505 aa28.14■■■□□ 2.09
CHKA-202ENST00000356135 TTLL1O95922 423 aa28.14■■■□□ 2.09
CHKA-202ENST00000356135 ICA1Q05084 483 aa28.14■■■□□ 2.09
CHKA-202ENST00000356135 SH2B1Q9NRF2 756 aaPredicted RBP28.14■■■□□ 2.09
CHKA-202ENST00000356135 SYNE3Q6ZMZ3 975 aa28.13■■■□□ 2.09
CHKA-202ENST00000356135 CATIPQ7Z7H3 387 aa28.13■■■□□ 2.09
CHKA-202ENST00000356135 PNMA1Q8ND90 353 aa28.13■■■□□ 2.09
CHKA-202ENST00000356135 ZNF408Q9H9D4 720 aa28.13■■■□□ 2.09
CHKA-202ENST00000356135 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.13■■■□□ 2.09
CHKA-202ENST00000356135 CUL4AQ13619 759 aa28.12■■■□□ 2.09
CHKA-202ENST00000356135 PPP1R12BO60237 982 aaPredicted RBP28.11■■■□□ 2.09
CHKA-202ENST00000356135 TOP1P11387 765 aaKnown RBP28.11■■■□□ 2.09
CHKA-202ENST00000356135 NF2P35240 595 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 TROAPQ12815 778 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 RASGRP2Q7LDG7 609 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 GTF3C6Q969F1 213 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 A0A1W2PRG0 241 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 HSP90AA1P07900 732 aaKnown RBP28.11■■■□□ 2.09
CHKA-202ENST00000356135 ASNSP08243 561 aa28.11■■■□□ 2.09
CHKA-202ENST00000356135 METAP2P50579 478 aaKnown RBP eCLIP28.11■■■□□ 2.09
CHKA-202ENST00000356135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.11■■■□□ 2.09
CHKA-202ENST00000356135 CDC27P30260 824 aa28.1■■■□□ 2.09
CHKA-202ENST00000356135 ADD1P35611 737 aaKnown RBP28.1■■■□□ 2.09
CHKA-202ENST00000356135 ECE1P42892 770 aa28.1■■■□□ 2.09
CHKA-202ENST00000356135 TTLL12Q14166 644 aaPredicted RBP28.1■■■□□ 2.09
CHKA-202ENST00000356135 ACER1Q8TDN7 264 aa28.1■■■□□ 2.09
CHKA-202ENST00000356135 FAM217BQ9NTX9 383 aaPredicted RBP28.1■■■□□ 2.09
CHKA-202ENST00000356135 NYAP2Q9P242 653 aa28.1■■■□□ 2.09
CHKA-202ENST00000356135 GOLGA8AA7E2F4 631 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 PPFIA3O75145 1194 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 CHADLQ6NUI6 762 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 SCYL3Q8IZE3 742 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.09■■■□□ 2.09
CHKA-202ENST00000356135 FANCBQ8NB91 859 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 CHMP5Q9NZZ3 219 aa28.09■■■□□ 2.09
CHKA-202ENST00000356135 KIF3CO14782 793 aa28.08■■■□□ 2.09
CHKA-202ENST00000356135 MAP3K9P80192 1104 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms