RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.51
CTSA-202ENST00000354880 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 STX6O43752 255 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 CDKL5O76039 1030 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 BRD1O95696 1058 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 RASA3Q14644 834 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 CERKLQ49MI3 558 aaPredicted RBP18.21■□□□□ 0.51
CTSA-202ENST00000354880 LARP1BQ659C4 914 aaKnown RBP18.21■□□□□ 0.51
CTSA-202ENST00000354880 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 ZDHHC9Q9Y397 364 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
CTSA-202ENST00000354880 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
CTSA-202ENST00000354880 LMOD1P29536 600 aaPredicted RBP18.2■□□□□ 0.5
CTSA-202ENST00000354880 NOVP48745 357 aa18.2■□□□□ 0.5
CTSA-202ENST00000354880 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
CTSA-202ENST00000354880 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
CTSA-202ENST00000354880 TRPM4Q8TD43 1214 aa18.2■□□□□ 0.5
CTSA-202ENST00000354880 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
CTSA-202ENST00000354880 IGKV6D-41A0A0C4DH26 115 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 NTRK3Q16288 839 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 TMEM47Q9BQJ4 181 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTSA-202ENST00000354880 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 PGAP2Q9UHJ9 254 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 ZC3H4Q9UPT8 1303 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 PPFIA3O75145 1194 aa18.19■□□□□ 0.5
CTSA-202ENST00000354880 RBM28Q9NW13 759 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
CTSA-202ENST00000354880 TBC1D12O60347 775 aa18.18■□□□□ 0.5
CTSA-202ENST00000354880 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
CTSA-202ENST00000354880 IFNAR1P17181 557 aa18.18■□□□□ 0.5
CTSA-202ENST00000354880 CDAN1Q8IWY9 1227 aa18.18■□□□□ 0.5
CTSA-202ENST00000354880 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
CTSA-202ENST00000354880 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
CTSA-202ENST00000354880 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
CTSA-202ENST00000354880 CTCFLQ8NI51 663 aaPredicted RBP18.17■□□□□ 0.5
CTSA-202ENST00000354880 MAP3K14Q99558 947 aa18.17■□□□□ 0.5
CTSA-202ENST00000354880 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
CTSA-202ENST00000354880 ORC3Q9UBD5 711 aaPredicted RBP18.17■□□□□ 0.5
CTSA-202ENST00000354880 TTLL1O95922 423 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 HIRAP54198 1017 aaPredicted RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 ANGEL2Q5VTE6 544 aaKnown RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 PHKBQ93100 1093 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 DEFB129Q9H1M3 183 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 VPS37CA5D8V6 355 aaPredicted RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 FOXD4L5Q5VV16 416 aaPredicted RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 TMEM179Q6ZVK1 233 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 FOXD4L4Q8WXT5 416 aaPredicted RBP18.16■□□□□ 0.5
CTSA-202ENST00000354880 MTMR6Q9Y217 621 aa18.16■□□□□ 0.5
CTSA-202ENST00000354880 GDF11O95390 407 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 KIF5BP33176 963 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 MAP3K10Q02779 954 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 SSRP1Q08945 709 aaKnown RBP18.15■□□□□ 0.5
CTSA-202ENST00000354880 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 CLEC10AQ8IUN9 316 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 L3MBTL3Q96JM7 780 aaPredicted RBP18.15■□□□□ 0.5
CTSA-202ENST00000354880 KANSL2Q9H9L4 492 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 CABP5Q9NP86 173 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 GGA3Q9NZ52 723 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 CLIP2Q9UDT6 1046 aa18.15■□□□□ 0.5
CTSA-202ENST00000354880 STK36Q9NRP7 1315 aa18.14■□□□□ 0.5
CTSA-202ENST00000354880 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.5
CTSA-202ENST00000354880 SHROOM1Q2M3G4 852 aaPredicted RBP18.14■□□□□ 0.5
CTSA-202ENST00000354880 TRIM22Q8IYM9 498 aa18.14■□□□□ 0.5
CTSA-202ENST00000354880 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.5
CTSA-202ENST00000354880 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.5
CTSA-202ENST00000354880 SLC26A6Q9BXS9 759 aa18.14■□□□□ 0.5
CTSA-202ENST00000354880 GLTPD2A6NH11 291 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 H3BQV1 296 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 RRP1BQ14684 758 aaKnown RBP18.14■□□□□ 0.49
CTSA-202ENST00000354880 GRM4Q14833 912 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 TMTC3Q6ZXV5 915 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 NBPF11Q86T75 865 aa18.14■□□□□ 0.49
CTSA-202ENST00000354880 MYH4Q9Y623 1939 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 PLEKHA8P1O95397 391 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 GH2P01242 217 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 SEPT2Q15019 361 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 CLEC17AQ6ZS10 378 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 GBP4Q96PP9 640 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
CTSA-202ENST00000354880 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 F13A1P00488 732 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 GUCY1A2P33402 732 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 ICA1Q05084 483 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 FUT2Q10981 343 aa18.12■□□□□ 0.49
CTSA-202ENST00000354880 LRRC47Q8N1G4 583 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms