RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NKG7Q16617 165 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 PKN3Q6P5Z2 889 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SKAP1Q86WV1 359 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ZBTB38Q8NAP3 1195 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 PPP1R14AQ96A00 147 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 MTMR8Q96EF0 704 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 MFSD3Q96ES6 412 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 MPHOSPH6Q99547 160 aaKnown RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 VTA1Q9NP79 307 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SUSD2Q9UGT4 822 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 PLEKHD1A6NEE1 506 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 CBFA2T2O43439 604 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SIN3BO75182 1162 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GSTP1P09211 210 aaKnown RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 RAG1P15918 1043 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 NFE2Q16621 373 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 PRSS53Q2L4Q9 553 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SLCO4C1Q6ZQN7 724 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 LRRTM3Q86VH5 581 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SLC7A14Q8TBB6 771 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 KISS1RQ969F8 398 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ACSBG1Q96GR2 724 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 SLC39A13Q96H72 371 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 FBRSQ9HAH7 460 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 MRPS23Q9Y3D9 190 aaKnown RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 RAPGEF6Q8TEU7 1601 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 OIP5O43482 229 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 TSPAN6O43657 245 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 MAN1A2O60476 641 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 KPNA6O60684 536 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 DEAF1O75398 565 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 DNAJC8O75937 253 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 EYA4O95677 639 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 NME1P15531 152 aaKnown RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 NRLP54845 237 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 PPP2R2AP63151 447 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 INSM1Q01101 510 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GSTM4Q03013 218 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ADGRE1Q14246 886 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 GNPTABQ3T906 1256 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 CT47A1Q5JQC4 288 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 Q6ZS46 218 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 NLRC3Q7RTR2 1065 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 KRT26Q7Z3Y9 468 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ADCY4Q8NFM4 1077 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 TIFAQ96CG3 184 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 ACSF2Q96CM8 615 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-202ENST00000354071 YIPF4Q9BSR8 244 aa2.22□□□□□ -2.05
BRCA1-202ENST00000354071 AKAP10O43572 662 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ATE1O95260 518 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PLCG1P19174 1290 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TMEM67Q5HYA8 995 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PPM1JQ5JR12 505 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 EEPD1Q7L9B9 569 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ST13P5Q8NFI4 369 aaPredicted RBP2.21□□□□□ -2.06
BRCA1-202ENST00000354071 XAGE3Q8WTP9 111 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 CHAC2Q8WUX2 184 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 BRF1Q92994 677 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TRIM52Q96A61 297 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 RPS6KC1Q96S38 1066 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 MYH16Q9H6N6 1097 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 MINPP1Q9UNW1 487 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ITGAVP06756 1048 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 MAOBP27338 520 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 NLRP12P59046 1061 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 SV2CQ496J9 727 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 CMIPQ8IY22 773 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 SCLYQ96I15 445 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 SLC6A18Q96N87 628 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 SLC52A2Q9HAB3 445 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 CYP8B1Q9UNU6 501 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TRAF6Q9Y4K3 522 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 MEIS3P2A8K0S8 358 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 LINC01387J3KSC0 135 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PRC1O43663 620 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 RASGRP1O95267 797 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ADAMTS2O95450 1211 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 GHRHP01286 108 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 C6orf222P0C671 652 aaPredicted RBP2.21□□□□□ -2.06
BRCA1-202ENST00000354071 GRK4P32298 578 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 NTF4P34130 210 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TMPRSS15P98073 1019 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PPP2R3AQ06190 1150 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ITKQ08881 620 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 IKBKEQ14164 716 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ATL2Q8NHH9 583 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TTC9Q92623 222 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TNPO3Q9Y5L0 923 aaKnown RBP2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TACC3Q9Y6A5 838 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ROBO2Q9HCK4 1378 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 UBOX5O94941 541 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PAX3P23760 479 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 PPP2R5AQ15172 486 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 AKAP4Q5JQC9 854 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 GORABQ5T7V8 394 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 CCDC181Q5TID7 509 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 ABHD17CQ6PCB6 329 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 TPH2Q8IWU9 490 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 MTFR1LQ9H019 292 aa2.21□□□□□ -2.06
BRCA1-202ENST00000354071 CAAP1Q9H8G2 361 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms