RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MXRA7P84157 204 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 REXO1Q8N1G1 1221 aaKnown RBP17.86■□□□□ 0.45
PTPN11-201ENST00000351677 CCDC63Q8NA47 563 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 FANCBQ8NB91 859 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 ARPP21Q9UBL0 812 aaPredicted RBP17.86■□□□□ 0.45
PTPN11-201ENST00000351677 GJA3Q9Y6H8 435 aa17.86■□□□□ 0.45
PTPN11-201ENST00000351677 SLC9C1Q4G0N8 1177 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 B4DLN1 442 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-201ENST00000351677 MYCLP12524 364 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-201ENST00000351677 HPDP32754 393 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-201ENST00000351677 NDUFA8P51970 172 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 ZNF589Q86UQ0 364 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-201ENST00000351677 FAM170AA1A519 330 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 DNM3Q9UQ16 869 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 MAST3O60307 1309 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 TNKSO95271 1327 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 MAGEA1P43355 309 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 COPRSQ9NQ92 184 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
PTPN11-201ENST00000351677 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 BTBD18B2RXH4 712 aa17.85■□□□□ 0.45
PTPN11-201ENST00000351677 SIRT2Q8IXJ6 389 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 ARFGAP2Q8N6H7 521 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 PHKA1P46020 1223 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 CERS3Q8IU89 383 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 SMTNP53814 917 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 MYCT1Q8N699 235 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
PTPN11-201ENST00000351677 GLT8D2Q9H1C3 349 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 ABCA8O94911 1581 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 GCNT3O95395 438 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 CFBP00751 764 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 PPARDQ03181 441 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 TUBB2AQ13885 445 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 FMNL3Q8IVF7 1028 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 TUBB2BQ9BVA1 445 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
PTPN11-201ENST00000351677 ZBTB16Q05516 673 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 CPXCR1Q8N123 301 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 TMEM87AQ8NBN3 555 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 VTI1AQ96AJ9 217 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 GTF2IP78347 998 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.45
PTPN11-201ENST00000351677 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 KIFAP3Q92845 792 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 DESI2Q9BSY9 194 aa17.83■□□□□ 0.45
PTPN11-201ENST00000351677 ATP7BP35670 1465 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 CEP63Q96MT8 703 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 TTC14Q96N46 770 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 CMA1P23946 247 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 FNBP4Q8N3X1 1017 aaPredicted RBP17.83■□□□□ 0.44
PTPN11-201ENST00000351677 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.83■□□□□ 0.44
PTPN11-201ENST00000351677 AFAP1L1Q8TED9 768 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
PTPN11-201ENST00000351677 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.44
PTPN11-201ENST00000351677 NLRC4Q9NPP4 1024 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 CLASP1Q7Z460 1538 aa17.83■□□□□ 0.44
PTPN11-201ENST00000351677 CHRNDQ07001 517 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 GRM1Q13255 1194 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 MFSD14BQ5SR56 506 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 BLIDQ8IZY5 108 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 GPKOWQ92917 476 aaPredicted RBP eCLIP17.82■□□□□ 0.44
PTPN11-201ENST00000351677 RRAGAQ7L523 313 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 CYP21A2P08686 494 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 ZNF853P0CG23 659 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 CCDC6Q16204 474 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 FERP16591 822 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 TECP42680 631 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 KLHL7Q8IXQ5 586 aa17.82■□□□□ 0.44
PTPN11-201ENST00000351677 M0R2C6 588 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 INF2Q27J81 1249 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 MSANTD4Q8NCY6 345 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 USP40Q9NVE5 1235 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 CEP104O60308 925 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 POLD1P28340 1107 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 C10orf67Q8IYJ2 551 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 RABEP2Q9H5N1 569 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 FANCLQ9NW38 375 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 KCNJ18B7U540 433 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 KCNJ12Q14500 433 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 EFCAB6Q5THR3 1501 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 SREK1Q8WXA9 508 aaKnown RBP17.81■□□□□ 0.44
PTPN11-201ENST00000351677 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 NAP1L3Q99457 506 aaPredicted RBP17.81■□□□□ 0.44
PTPN11-201ENST00000351677 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
PTPN11-201ENST00000351677 MORC3Q14149 939 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 PLEKHA4Q9H4M7 779 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
PTPN11-201ENST00000351677 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms