RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C16orf86Q6ZW13 317 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 TXNRD2Q9NNW7 524 aa19.3■□□□□ 0.68
RAB5C-201ENST00000346213 A0A0D9SFI3 127 aa19.29■□□□□ 0.68
RAB5C-201ENST00000346213 OSBPP22059 807 aa19.29■□□□□ 0.68
RAB5C-201ENST00000346213 ANKRD13CQ8N6S4 541 aa19.29■□□□□ 0.68
RAB5C-201ENST00000346213 FAM227BQ96M60 508 aa19.29■□□□□ 0.68
RAB5C-201ENST00000346213 GABRQQ9UN88 632 aa19.29■□□□□ 0.68
RAB5C-201ENST00000346213 USP17L10C9JJH3 530 aa19.28■□□□□ 0.68
RAB5C-201ENST00000346213 PSMC4P43686 418 aa19.28■□□□□ 0.68
RAB5C-201ENST00000346213 P2RX7Q99572 595 aaKnown RBP19.28■□□□□ 0.68
RAB5C-201ENST00000346213 AS3MTQ9HBK9 375 aa19.28■□□□□ 0.68
RAB5C-201ENST00000346213 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
RAB5C-201ENST00000346213 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
RAB5C-201ENST00000346213 TBC1D2Q9BYX2 928 aa19.27■□□□□ 0.68
RAB5C-201ENST00000346213 GINM1Q9NU53 330 aa19.27■□□□□ 0.68
RAB5C-201ENST00000346213 ZFYP08048 801 aaPredicted RBP19.27■□□□□ 0.67
RAB5C-201ENST00000346213 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.67
RAB5C-201ENST00000346213 NKX2-3Q8TAU0 364 aa19.27■□□□□ 0.67
RAB5C-201ENST00000346213 SH3TC2Q8TF17 1288 aa19.27■□□□□ 0.67
RAB5C-201ENST00000346213 C12orf42Q96LP6 360 aa19.27■□□□□ 0.67
RAB5C-201ENST00000346213 BACH2Q9BYV9 841 aa19.27■□□□□ 0.67
RAB5C-201ENST00000346213 MPHOSPH10O00566 681 aaKnown RBP19.26■□□□□ 0.67
RAB5C-201ENST00000346213 VCAM1P19320 739 aa19.26■□□□□ 0.67
RAB5C-201ENST00000346213 RASA1P20936 1047 aa19.26■□□□□ 0.67
RAB5C-201ENST00000346213 HOXA7P31268 230 aaPredicted RBP19.26■□□□□ 0.67
RAB5C-201ENST00000346213 PRKCZQ05513 592 aa19.26■□□□□ 0.67
RAB5C-201ENST00000346213 SBK1Q52WX2 424 aa19.26■□□□□ 0.67
RAB5C-201ENST00000346213 KIAA1683Q9H0B3 1180 aa19.26■□□□□ 0.67
RAB5C-201ENST00000346213 POTEFA5A3E0 1075 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 CNMDO75829 334 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 RGS19P49795 217 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 IFNL3Q8IZI9 196 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 SMCR8Q8TEV9 937 aaPredicted RBP19.25■□□□□ 0.67
RAB5C-201ENST00000346213 IL25Q9H293 177 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
RAB5C-201ENST00000346213 Q3C1V9 767 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 EVI5LQ96CN4 794 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 OSBPL3Q9H4L5 887 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 RBPJLQ9UBG7 517 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 ARPP21Q9UBL0 812 aaPredicted RBP19.24■□□□□ 0.67
RAB5C-201ENST00000346213 SRRDQ9UH36 339 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 SWAP70Q9UH65 585 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 MGAMO43451 1857 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 MINDY4BA8MYZ0 360 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 C19orf81C9J6K1 198 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 PRDM1O75626 825 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 GSPT1P15170 499 aaKnown RBP19.24■□□□□ 0.67
RAB5C-201ENST00000346213 HERVK_113P62684 666 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 NMIQ13287 307 aaPredicted RBP19.24■□□□□ 0.67
RAB5C-201ENST00000346213 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
RAB5C-201ENST00000346213 PLXNB2O15031 1838 aa19.23■□□□□ 0.67
RAB5C-201ENST00000346213 PATL2C9JE40 543 aaKnown RBP19.23■□□□□ 0.67
RAB5C-201ENST00000346213 FAM110CQ1W6H9 321 aa19.23■□□□□ 0.67
RAB5C-201ENST00000346213 GIMAP6Q6P9H5 292 aa19.23■□□□□ 0.67
RAB5C-201ENST00000346213 ZNF333Q96JL9 665 aa19.23■□□□□ 0.67
RAB5C-201ENST00000346213 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
RAB5C-201ENST00000346213 RLFQ13129 1914 aa19.22■□□□□ 0.67
RAB5C-201ENST00000346213 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
RAB5C-201ENST00000346213 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
RAB5C-201ENST00000346213 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
RAB5C-201ENST00000346213 FEZ1Q99689 392 aa19.22■□□□□ 0.67
RAB5C-201ENST00000346213 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
RAB5C-201ENST00000346213 MORF4L1Q9UBU8 362 aa19.22■□□□□ 0.67
RAB5C-201ENST00000346213 MYPNQ86TC9 1320 aa19.21■□□□□ 0.67
RAB5C-201ENST00000346213 PORCNQ9H237 461 aa19.21■□□□□ 0.67
RAB5C-201ENST00000346213 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
RAB5C-201ENST00000346213 MYH8P13535 1937 aa19.21■□□□□ 0.67
RAB5C-201ENST00000346213 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 TDO2P48775 406 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 ICA1Q05084 483 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 MTFR1Q15390 333 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 NBPF3Q9H094 633 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 PNMA3Q9UL41 463 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 SPDYE16A6NNV3 312 aaPredicted RBP19.2■□□□□ 0.66
RAB5C-201ENST00000346213 APPP05067 770 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 EEF2P13639 858 aaKnown RBP19.2■□□□□ 0.66
RAB5C-201ENST00000346213 IRX3P78415 501 aaPredicted RBP19.2■□□□□ 0.66
RAB5C-201ENST00000346213 RILPL2Q969X0 211 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
RAB5C-201ENST00000346213 A0A0G2JMZ2 1700 aa19.2■□□□□ 0.66
RAB5C-201ENST00000346213 GNAT2P19087 354 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 FLT3LGP49771 235 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 FCGRTP55899 365 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.19■□□□□ 0.66
RAB5C-201ENST00000346213 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
RAB5C-201ENST00000346213 TRIM6-TRIM34B2RNG4 842 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 ELNP15502 786 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 SDSP20132 328 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 PPARAQ07869 468 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 KIF22Q14807 665 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
RAB5C-201ENST00000346213 GCLCP48506 637 aaPredicted RBP19.17■□□□□ 0.66
RAB5C-201ENST00000346213 SLC9C1Q4G0N8 1177 aa19.17■□□□□ 0.66
RAB5C-201ENST00000346213 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms