RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 RASGRP2Q7LDG7 609 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 TADA2BQ86TJ2 420 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 NKX2-3Q8TAU0 364 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 MYCBPQ99417 103 aaPredicted RBP24.24■■□□□ 1.47
TRIM3-201ENST00000345851 DACH1Q9UI36 760 aa24.24■■□□□ 1.47
TRIM3-201ENST00000345851 LOC102724428A0A0B4J2F2 783 aa24.23■■□□□ 1.47
TRIM3-201ENST00000345851 SYF2O95926 243 aaKnown RBP24.23■■□□□ 1.47
TRIM3-201ENST00000345851 SIK1P57059 783 aa24.23■■□□□ 1.47
TRIM3-201ENST00000345851 EFCAB13Q8IY85 973 aa24.23■■□□□ 1.47
TRIM3-201ENST00000345851 CRKLP46109 303 aaKnown RBP24.23■■□□□ 1.47
TRIM3-201ENST00000345851 MORC3Q14149 939 aa24.23■■□□□ 1.47
TRIM3-201ENST00000345851 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
TRIM3-201ENST00000345851 GREM2Q9H772 168 aa24.23■■□□□ 1.47
TRIM3-201ENST00000345851 MYL10Q9BUA6 226 aa24.22■■□□□ 1.47
TRIM3-201ENST00000345851 SENP2Q9HC62 589 aa24.22■■□□□ 1.47
TRIM3-201ENST00000345851 FXR1P51114 621 aaKnown RBP eCLIP24.22■■□□□ 1.47
TRIM3-201ENST00000345851 TRIM29Q14134 588 aa24.22■■□□□ 1.47
TRIM3-201ENST00000345851 WHAMMP3Q1A5X7 153 aa24.22■■□□□ 1.47
TRIM3-201ENST00000345851 UBN2Q6ZU65 1347 aa24.22■■□□□ 1.47
TRIM3-201ENST00000345851 MFAP3LO75121 409 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 COBLO75128 1261 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 ZMYND10O75800 440 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 PCCAP05165 728 aaPredicted RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 LIG3P49916 1009 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 ADORA1P30542 326 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 SMARCC1Q92922 1105 aaPredicted RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 NAA15Q9BXJ9 866 aaKnown RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 THRAP3Q9Y2W1 955 aaKnown RBP24.21■■□□□ 1.47
TRIM3-201ENST00000345851 ZNF213O14771 459 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 MYO6Q9UM54 1294 aa24.21■■□□□ 1.47
TRIM3-201ENST00000345851 ZMYM6O95789 1325 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 IL15P40933 162 aaPredicted RBP24.2■■□□□ 1.46
TRIM3-201ENST00000345851 APTXQ7Z2E3 356 aaKnown RBP24.2■■□□□ 1.46
TRIM3-201ENST00000345851 MYH8P13535 1937 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 IRS4O14654 1257 aaPredicted RBP24.2■■□□□ 1.46
TRIM3-201ENST00000345851 CASP1P29466 404 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 CDC25AP30304 524 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 PLCD1P51178 756 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 TUBB2AQ13885 445 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 MMS22LQ6ZRQ5 1243 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 USP49Q70CQ1 688 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 CCDC148Q8NFR7 591 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 SLF1Q9BQI6 1058 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 TUBB2BQ9BVA1 445 aa24.2■■□□□ 1.46
TRIM3-201ENST00000345851 CDCA7Q9BWT1 371 aaPredicted RBP24.2■■□□□ 1.46
TRIM3-201ENST00000345851 NRAPQ86VF7 1730 aa24.19■■□□□ 1.46
TRIM3-201ENST00000345851 ENC1O14682 589 aa24.19■■□□□ 1.46
TRIM3-201ENST00000345851 IFIT5Q13325 482 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 GSPT2Q8IYD1 628 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 SMYD4Q8IYR2 804 aaPredicted RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 PUS7LQ9H0K6 701 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 TTF2Q9UNY4 1162 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 PRPF6O94906 941 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 GYPCP04921 128 aa24.19■■□□□ 1.46
TRIM3-201ENST00000345851 CCT6AP40227 531 aaKnown RBP24.19■■□□□ 1.46
TRIM3-201ENST00000345851 TRIM10Q9UDY6 481 aa24.19■■□□□ 1.46
TRIM3-201ENST00000345851 NWD2Q9ULI1 1742 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 A0A087WUV0 522 aaPredicted RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 ITGA6P23229 1130 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 CCT5P48643 541 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 SARSP49591 514 aaKnown RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 TRIM28Q13263 835 aaKnown RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 HDAC6Q9UBN7 1215 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 BTBD18B2RXH4 712 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 IARSP41252 1262 aaKnown RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 ERVK-24P63145 666 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 TUBB4BP68371 445 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 CEP126Q9P2H0 1117 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 HPCAL4Q9UM19 191 aa24.18■■□□□ 1.46
TRIM3-201ENST00000345851 ANGEL1Q9UNK9 670 aaKnown RBP24.18■■□□□ 1.46
TRIM3-201ENST00000345851 IL6STP40189 918 aaPredicted RBP24.17■■□□□ 1.46
TRIM3-201ENST00000345851 AFMP43652 599 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 CPLX2Q6PUV4 134 aaKnown RBP24.17■■□□□ 1.46
TRIM3-201ENST00000345851 TTLL11Q8NHH1 800 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 KAT2BQ92831 832 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 HINFPQ9BQA5 517 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 CCDC87Q9NVE4 849 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 GUCA1BQ9UMX6 200 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 CYB5R4Q7L1T6 521 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 ADD3Q9UEY8 706 aaKnown RBP24.17■■□□□ 1.46
TRIM3-201ENST00000345851 SLIT2O94813 1529 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 RANBP6O60518 1105 aaKnown RBP24.17■■□□□ 1.46
TRIM3-201ENST00000345851 CDKL5O76039 1030 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 CD44P16070 742 aaKnown RBP24.17■■□□□ 1.46
TRIM3-201ENST00000345851 ARHGAP25P42331 645 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 WDR93Q6P2C0 686 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 PI16Q6UXB8 463 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 SLC26A6Q9BXS9 759 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 EHD4Q9H223 541 aa24.17■■□□□ 1.46
TRIM3-201ENST00000345851 SYNRGQ9UMZ2 1314 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 GGCXP38435 758 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 NT5DC1Q5TFE4 455 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 MCTP2Q6DN12 878 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 APOA5Q6Q788 366 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 NFXL1Q6ZNB6 911 aa24.16■■□□□ 1.46
TRIM3-201ENST00000345851 HELBQ8NG08 1087 aaPredicted RBP24.16■■□□□ 1.46
TRIM3-201ENST00000345851 CAPZA3Q96KX2 299 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms