RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 IFNAR1P17181 557 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 RSRC2Q7L4I2 434 aaKnown RBP18.29■□□□□ 0.52
SCARB1-202ENST00000339570 TXLNBQ8N3L3 684 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 CHP1Q99653 195 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 TRIM49BA6NDI0 452 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 VEGFAP15692 232 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-202ENST00000339570 SRGAP1Q7Z6B7 1085 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 AK7Q96M32 723 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-202ENST00000339570 ANKZF1Q9H8Y5 726 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 PCDH11XQ9BZA7 1347 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 PCDH11YQ9BZA8 1340 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 RIN2Q8WYP3 895 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-202ENST00000339570 WASF1Q92558 559 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 NACAP1Q9BZK3 213 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 TNKSO95271 1327 aa18.29■□□□□ 0.52
SCARB1-202ENST00000339570 GOLGA6L9A6NEM1 432 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 RASGRP4Q8TDF6 673 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCARB1-202ENST00000339570 PSMB7Q99436 277 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 GDAQ9Y2T3 454 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
SCARB1-202ENST00000339570 DEXIO95424 95 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 GYPCP04921 128 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 KRT9P35527 623 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 PIGBQ92521 554 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 RSPH14Q9UHP6 348 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 KIF13AQ9H1H9 1805 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
SCARB1-202ENST00000339570 FAM47AQ5JRC9 791 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
SCARB1-202ENST00000339570 ADAMTS3O15072 1205 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 TUBB4AP04350 444 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 IL2RBP14784 551 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 UBXN1Q04323 297 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 PTGDRQ13258 359 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 CUL4BQ13620 913 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 CDC23Q9UJX2 597 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 SRPRBQ9Y5M8 271 aaKnown RBP18.27■□□□□ 0.52
SCARB1-202ENST00000339570 C1orf167Q5SNV9 1468 aa18.27■□□□□ 0.52
SCARB1-202ENST00000339570 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.518e-7■■□□□ 13.5
SCARB1-202ENST00000339570 DNA2P51530 1060 aa18.27■□□□□ 0.51
SCARB1-202ENST00000339570 HSP90B2PQ58FF3 399 aa18.27■□□□□ 0.51
SCARB1-202ENST00000339570 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.51
SCARB1-202ENST00000339570 CTAGE15A4D2H0 777 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 MFAP3LO75121 409 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 STARD3NLO95772 234 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 CTAGE8P0CG41 777 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 ERVK-24P63145 666 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 SPATA1Q5VX52 437 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 LEKR1Q6ZMV7 388 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 CTAGE6Q86UF2 777 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 CTAGE4Q8IX94 777 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 A0A1B0GTH6 734 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 KRT31Q15323 416 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 KRT23Q9C075 422 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 FEZ2Q9UHY8 353 aaPredicted RBP18.26■□□□□ 0.51
SCARB1-202ENST00000339570 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
SCARB1-202ENST00000339570 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 CSF1RP07333 972 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 SLC5A1P13866 664 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 GYG1P46976 350 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 MYO5AQ9Y4I1 1855 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 PP2D1A8MPX8 630 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 POLD4Q9HCU8 107 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 ADD3Q9UEY8 706 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 KRT2P35908 639 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 SARSP49591 514 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 PPARAQ07869 468 aa18.25■□□□□ 0.51
SCARB1-202ENST00000339570 KCTD19Q17RG1 926 aaPredicted RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
SCARB1-202ENST00000339570 LIFRP42702 1097 aa18.24■□□□□ 0.51
SCARB1-202ENST00000339570 NLRP5P59047 1200 aa18.24■□□□□ 0.51
SCARB1-202ENST00000339570 DNAJC21Q5F1R6 531 aaKnown RBP18.24■□□□□ 0.51
SCARB1-202ENST00000339570 DZIP3Q86Y13 1208 aaKnown RBP18.24■□□□□ 0.51
SCARB1-202ENST00000339570 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
SCARB1-202ENST00000339570 NAPGQ99747 312 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-202ENST00000339570 CCDC151A5D8V7 595 aa18.24■□□□□ 0.51
SCARB1-202ENST00000339570 FOXP1Q9H334 677 aaPredicted RBP18.24■□□□□ 0.51
SCARB1-202ENST00000339570 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
SCARB1-202ENST00000339570 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 BEND6Q5SZJ8 279 aaPredicted RBP18.23■□□□□ 0.51
SCARB1-202ENST00000339570 TTC19Q6DKK2 380 aaPredicted RBP18.23■□□□□ 0.51
SCARB1-202ENST00000339570 SMIM5Q71RC9 77 aa18.23■□□□□ 0.51
SCARB1-202ENST00000339570 HDXQ7Z353 690 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms