RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RETREG2Q8NC44 543 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 CSRNP1Q96S65 589 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 KIAA0586Q9BVV6 1533 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TSPY2A6NKD2 308 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 HSPA6P17066 643 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 MKRN3Q13064 507 aaKnown RBP6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TMTC3Q6ZXV5 915 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 GDPD2Q9HCC8 539 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 ASIC3Q9UHC3 531 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TCOF1Q13428 1488 aaKnown RBP6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TLDC2A0PJX2 215 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 STRN3Q13033 797 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 NONOQ15233 471 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TRIM60Q495X7 471 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 DHX32Q7L7V1 743 aaKnown RBP6.09□□□□□ -1.43
PTPRB-202ENST00000334414 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 LRRC8CQ8TDW0 803 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 TMEM87BQ96K49 555 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 FAM81BQ96LP2 452 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 XAB2Q9HCS7 855 aaKnown RBP6.09□□□□□ -1.43
PTPRB-202ENST00000334414 MRGBPQ9NV56 204 aa6.09□□□□□ -1.43
PTPRB-202ENST00000334414 IL15P40933 162 aaPredicted RBP6.09□□□□□ -1.44
PTPRB-202ENST00000334414 PEX26Q7Z412 305 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 RHPN1Q8TCX5 695 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 DCTPP1Q9H773 170 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 DIABLOQ9NR28 239 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 PPP2R2CQ9Y2T4 447 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 RBM8AQ9Y5S9 174 aaKnown RBP6.09□□□□□ -1.44
PTPRB-202ENST00000334414 SMIM23A6NLE4 172 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 RNF113AO15541 343 aaKnown RBP6.09□□□□□ -1.44
PTPRB-202ENST00000334414 MYL1P05976 194 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 MYL6BP14649 208 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 GARSP41250 739 aaKnown RBP6.09□□□□□ -1.44
PTPRB-202ENST00000334414 AK2P54819 239 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 NT5C3AQ9H0P0 336 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 BOLA2Q9H3K6 86 aa6.09□□□□□ -1.44
PTPRB-202ENST00000334414 RAPGEF1Q13905 1077 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 LRRC8AQ8IWT6 810 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 SH2D4AQ9H788 454 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 SERPINB6P35237 376 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 TADA2BQ86TJ2 420 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CCDC13Q8IYE1 715 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 PAG1Q9NWQ8 432 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 TXNDC9O14530 226 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CHUKO15111 745 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 PPP2R5DQ14738 602 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CCDC125Q86Z20 511 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 KRT12Q99456 494 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CABP5Q9NP86 173 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CFAP73A6NFT4 308 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 PEX19P40855 299 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 EMBQ6PCB8 327 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 C16orf87Q6PH81 154 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 EP400NLQ6ZTU2 488 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 USP26Q9BXU7 913 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 RRAGDQ9NQL2 400 aaPredicted RBP6.08□□□□□ -1.44
PTPRB-202ENST00000334414 MCF2P10911 925 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 KIFC2Q96AC6 838 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 RILPQ96NA2 401 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 STK38LQ9Y2H1 464 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 LAMC3Q9Y6N6 1575 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 RWDD2BP57060 319 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CXorf38Q8TB03 319 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 IWS1Q96ST2 819 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 ANKIB1Q9P2G1 1089 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 KCNH3Q9ULD8 1083 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 SAMM50Q9Y512 469 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 ZSCAN29Q8IWY8 852 aaPredicted RBP6.08□□□□□ -1.44
PTPRB-202ENST00000334414 CDKL2Q92772 493 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 NAPAP54920 295 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 OCA2Q04671 838 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 TBC1D8BQ0IIM8 1120 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 MUM1L1Q5H9M0 696 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 BAG5Q9UL15 447 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 TRPM2O94759 1503 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 TMED1Q13445 227 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 POSTNQ15063 836 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 MIS18AQ9NYP9 233 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
PTPRB-202ENST00000334414 ESRRBO95718 433 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 RPS6KB1P23443 525 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 PPP2R5AQ15172 486 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 ENAHQ8N8S7 591 aaPredicted RBP6.08□□□□□ -1.44
PTPRB-202ENST00000334414 DHX58Q96C10 678 aa6.08□□□□□ -1.44
PTPRB-202ENST00000334414 SHROOM2Q13796 1616 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SH3BP5O60239 455 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SND1Q7KZF4 910 aaKnown RBP eCLIP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 LZICQ8WZA0 190 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 EXOC5O00471 708 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SERPINI2O75830 405 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 TBC1D8O95759 1140 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 APOEP02649 317 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 KRT39Q6A163 491 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 KIF2CQ99661 725 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 IPO11Q9UI26 975 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 MID2Q9UJV3 735 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 MAD1L1Q9Y6D9 718 aa6.07□□□□□ -1.44
PTPRB-202ENST00000334414 CDK13Q14004 1512 aaKnown RBP6.07□□□□□ -1.44
PTPRB-202ENST00000334414 SERPINB2P05120 415 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms