RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 TRAF1Q13077 416 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 DPCR1Q3MIW9 517 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 ARMC2Q8NEN0 867 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 BAG1Q99933 345 aaPredicted RBP19.4■□□□□ 0.7
PRKCD-201ENST00000330452 SPATS2LQ9NUQ6 558 aaKnown RBP19.4■□□□□ 0.7
PRKCD-201ENST00000330452 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 PHLPP2Q6ZVD8 1323 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
PRKCD-201ENST00000330452 YEATS4O95619 227 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 MRPL12P52815 198 aaKnown RBP19.39■□□□□ 0.7
PRKCD-201ENST00000330452 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 SEC31BQ9NQW1 1179 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 KIAA1468Q9P260 1216 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 DNAI1Q9UI46 699 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 ODF2LQ9ULJ1 636 aa19.39■□□□□ 0.7
PRKCD-201ENST00000330452 NEDD4P46934 1319 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.39■□□□□ 0.69
PRKCD-201ENST00000330452 B4E1Z4 1266 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 MARCKSP29966 332 aaPredicted RBP19.39■□□□□ 0.69
PRKCD-201ENST00000330452 SUSD4Q5VX71 490 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 ANO1Q5XXA6 986 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 CCDC102BQ68D86 513 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 BRAPQ7Z569 592 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 ANGEL1Q9UNK9 670 aaKnown RBP19.39■□□□□ 0.69
PRKCD-201ENST00000330452 ABCC12Q96J65 1359 aa19.39■□□□□ 0.69
PRKCD-201ENST00000330452 ETF1P62495 437 aaKnown RBP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 PHKBQ93100 1093 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 CABS1Q96KC9 395 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 CD248Q9HCU0 757 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 AKAP11Q9UKA4 1901 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 ZNF202O95125 648 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 PDE8BO95263 885 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 KLHL23Q8NBE8 558 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 CLIC6Q96NY7 704 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 WDHD1O75717 1129 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 URI1O94763 535 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 PDE6AP16499 860 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 CDC27P30260 824 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 RDXP35241 583 aaKnown RBP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 METAP2P50579 478 aaKnown RBP eCLIP19.38■□□□□ 0.69
PRKCD-201ENST00000330452 PSMD2Q13200 908 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 MCM6Q14566 821 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 ALG1Q9BT22 464 aa19.38■□□□□ 0.69
PRKCD-201ENST00000330452 UTRNP46939 3433 aa19.37■□□□□ 0.69
PRKCD-201ENST00000330452 SH2B2O14492 632 aaPredicted RBP19.37■□□□□ 0.69
PRKCD-201ENST00000330452 MYL10Q9BUA6 226 aa19.37■□□□□ 0.69
PRKCD-201ENST00000330452 NAT10Q9H0A0 1025 aaKnown RBP19.37■□□□□ 0.69
PRKCD-201ENST00000330452 AHDC1Q5TGY3 1603 aaPredicted RBP19.37■□□□□ 0.69
PRKCD-201ENST00000330452 PLCH1Q4KWH8 1693 aa19.37■□□□□ 0.69
PRKCD-201ENST00000330452 ICA1Q05084 483 aa19.37■□□□□ 0.69
PRKCD-201ENST00000330452 ISM2Q6H9L7 571 aa19.37■□□□□ 0.69
PRKCD-201ENST00000330452 ZMYM6O95789 1325 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 UBE2Q2LH0YL09 131 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 CHUKO15111 745 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 PFKFB1P16118 471 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 RPS6KA3P51812 740 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 GNL2Q13823 731 aaKnown RBP19.36■□□□□ 0.69
PRKCD-201ENST00000330452 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
PRKCD-201ENST00000330452 UBE3CQ15386 1083 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 SKIDA1Q1XH10 827 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 MICAL1Q8TDZ2 1067 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 FAM169AQ9Y6X4 670 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 MROH7-TTC4A0A0A0MT08 1334 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 WDR19Q8NEZ3 1342 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 CCDC151A5D8V7 595 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 FANCGO15287 622 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 SLC3A2P08195 630 aaKnown RBP19.36■□□□□ 0.69
PRKCD-201ENST00000330452 APOA5Q6Q788 366 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 HOMER1Q86YM7 354 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 CCDC87Q9NVE4 849 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 MYO5AQ9Y4I1 1855 aaKnown RBP19.36■□□□□ 0.69
PRKCD-201ENST00000330452 MYH7P12883 1935 aa19.36■□□□□ 0.69
PRKCD-201ENST00000330452 MAFGO15525 162 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 DHX8Q14562 1220 aaKnown RBP19.35■□□□□ 0.69
PRKCD-201ENST00000330452 KRT40Q6A162 431 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 ZNF512BQ96KM6 892 aaPredicted RBP19.35■□□□□ 0.69
PRKCD-201ENST00000330452 NIP7Q9Y221 180 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCD-201ENST00000330452 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 TMCO5BA8MYB1 307 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 TBC1D25Q3MII6 688 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 DNAJC14Q6Y2X3 702 aaPredicted RBP19.35■□□□□ 0.69
PRKCD-201ENST00000330452 RSRC2Q7L4I2 434 aaKnown RBP19.35■□□□□ 0.69
PRKCD-201ENST00000330452 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 ANKRD18AQ8IVF6 992 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
PRKCD-201ENST00000330452 PDE8AO60658 829 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 FAM163BP0C2L3 166 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 CCDC96Q2M329 555 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 AMIGO3Q86WK7 504 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 IQCA1Q86XH1 822 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 AIDAQ96BJ3 306 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 STRBPQ96SI9 672 aaKnown RBP19.34■□□□□ 0.69
PRKCD-201ENST00000330452 IQSEC3Q9UPP2 1182 aaPredicted RBP19.34■□□□□ 0.69
PRKCD-201ENST00000330452 SLIT2O94813 1529 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 CTDSPL2Q05D32 466 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms