RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 PDILTQ8N807 584 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 UBAC1Q9BSL1 405 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 ST7Q9NRC1 585 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 TOMM22Q9NS69 142 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 ZNF804BA4D1E1 1349 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 TNKSO95271 1327 aa9.93□□□□□ -0.82
CLK1-201ENST00000321356 COL4A1P02462 1669 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 SEMA3EO15041 775 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
CLK1-201ENST00000321356 BMP15O95972 392 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 CASQ1P31415 396 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 GNG11P61952 73 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 CCDC152Q4G0S7 254 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 SPATA1Q5VX52 437 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 TMCO3Q6UWJ1 677 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 ADGRA1Q86SQ6 560 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 MIGA1Q8NAN2 632 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 NUP133Q8WUM0 1156 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 ESR2Q92731 530 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 TNFRSF25Q93038 417 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 UBXN6Q9BZV1 441 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 BTG4Q9NY30 223 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 SCN7AQ01118 1682 aa9.92□□□□□ -0.82
CLK1-201ENST00000321356 FGRP09769 529 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 XBP1P17861 261 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 CYP7A1P22680 504 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 FECHP22830 423 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 KRT2P35908 639 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 DPYDQ12882 1025 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 NPY5RQ15761 445 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 PARP10Q53GL7 1025 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 EARS2Q5JPH6 523 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 TAF3Q5VWG9 929 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 INTS5Q6P9B9 1019 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 ENAHQ8N8S7 591 aaPredicted RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 PAGE5Q96GU1 130 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 RIOK1Q9BRS2 568 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 NAA15Q9BXJ9 866 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 MRPL44Q9H9J2 332 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 SYNRGQ9UMZ2 1314 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 BAZ2AQ9UIF9 1905 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 KAT6BQ8WYB5 2073 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 STRCQ7RTU9 1775 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 AKR1B15C9JRZ8 316 aaPredicted RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 TEX33O43247 280 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 CAMTA2O94983 1202 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 NTSR2O95665 410 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 CCDC175P0C221 793 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 HSPA2P54652 639 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 PPP2R3AQ06190 1150 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 DHX58Q96C10 678 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 ZSCAN10Q96SZ4 725 aaPredicted RBP9.91□□□□□ -0.82
CLK1-201ENST00000321356 VPS54Q9P1Q0 977 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 ADGRG1Q9Y653 693 aa9.91□□□□□ -0.82
CLK1-201ENST00000321356 MAGEB6P1A0A0J9YX57 407 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 SMIM22K7EJ46 135 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 WNT7AO00755 349 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 PCP11498 1178 aaKnown RBP9.9□□□□□ -0.82
CLK1-201ENST00000321356 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 AKAP17AQ02040 695 aaKnown RBP9.9□□□□□ -0.82
CLK1-201ENST00000321356 CHRNDQ07001 517 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 TROAPQ12815 778 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 MTF1Q14872 753 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 FAM177A1Q8N128 213 aaPredicted RBP9.9□□□□□ -0.82
CLK1-201ENST00000321356 SDR42E1Q8WUS8 393 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 RABGGTAQ92696 567 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 DESI2Q9BSY9 194 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 BRIP1Q9BX63 1249 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 CCDC87Q9NVE4 849 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.82
CLK1-201ENST00000321356 ITIH6Q6UXX5 1313 aa9.9□□□□□ -0.82
CLK1-201ENST00000321356 MYH14Q7Z406 1995 aaKnown RBP9.9□□□□□ -0.82
CLK1-201ENST00000321356 CASZ1Q86V15 1759 aa9.9□□□□□ -0.83
CLK1-201ENST00000321356 MYH13Q9UKX3 1938 aa9.9□□□□□ -0.83
CLK1-201ENST00000321356 MINDY4BA8MYZ0 360 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 MFAP3LO75121 409 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 PLEKHA8P1O95397 391 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 TBC1D8O95759 1140 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 CALM1P0DP23 149 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 CALM2P0DP24 149 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 CALM3P0DP25 149 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 RBL2Q08999 1139 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 E2F4Q16254 413 aa9.89□□□□□ -0.83
CLK1-201ENST00000321356 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
CLK1-201ENST00000321356 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms