RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ZNF532Q9HCE3 1301 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 TNRC18O15417 2968 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 ABCB5Q2M3G0 1257 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 LRIT3Q3SXY7 679 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 SLC9C2Q5TAH2 1124 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 FAM109BQ6ICB4 259 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 CATSPERGQ6ZRH7 1159 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 SHCBP1Q8NEM2 672 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 GPRC5AQ8NFJ5 357 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 SH2D4AQ9H788 454 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 HMX1Q9NP08 348 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 EMILIN3Q9NT22 766 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 ECHDC1Q9NTX5 307 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 RBM27Q9P2N5 1060 aaKnown RBP10.18□□□□□ -0.78
MSL3-201ENST00000312196 PALD1Q9ULE6 856 aa10.18□□□□□ -0.78
MSL3-201ENST00000312196 TFRCP02786 760 aaKnown RBP10.17□□□□□ -0.78
MSL3-201ENST00000312196 HMGCS2P54868 508 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
MSL3-201ENST00000312196 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 TMEM179Q6ZVK1 233 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
MSL3-201ENST00000312196 EVI5O60447 810 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 GLRX3O76003 335 aaKnown RBP10.17□□□□□ -0.78
MSL3-201ENST00000312196 IGHA2P01877 340 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 GNAT2P19087 354 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 HERVK_113P62684 666 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 CCNA1P78396 465 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
MSL3-201ENST00000312196 JAG1P78504 1218 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 MB21D1Q8N884 522 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 LPAR1Q92633 364 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
MSL3-201ENST00000312196 SLC15A5A6NIM6 579 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 HOXC6P09630 235 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 GUCY1A2P33402 732 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 MTMR2Q13614 643 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 MORN1Q5T089 497 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 C12orf60Q5U649 245 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 GOLIM4O00461 696 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 MSCO60682 206 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 POLR3DP05423 398 aaPredicted RBP10.16□□□□□ -0.78
MSL3-201ENST00000312196 COL6A1P12109 1028 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 COPB2P35606 906 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 NT5C2P49902 561 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
MSL3-201ENST00000312196 C16orf86Q6ZW13 317 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.16□□□□□ -0.78
MSL3-201ENST00000312196 KBTBD3Q8NAB2 608 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
MSL3-201ENST00000312196 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 RBPJLQ9UBG7 517 aa10.16□□□□□ -0.78
MSL3-201ENST00000312196 SAP30BPQ9UHR5 308 aaKnown RBP10.16□□□□□ -0.78
MSL3-201ENST00000312196 FAM196BA6NMK8 535 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 GH2P01242 217 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 ABRAQ8N0Z2 381 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 ANKRD13CQ8N6S4 541 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 MIGA1Q8NAN2 632 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
MSL3-201ENST00000312196 MYH8P13535 1937 aa10.15□□□□□ -0.78
MSL3-201ENST00000312196 CNMDO75829 334 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 RGS2P41220 211 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 ERVK-9P63128 1117 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 ERVK-24P63145 666 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 PLEKHH3Q7Z736 793 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 LCORLQ8N3X6 602 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 DEFB118Q96PH6 123 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 HOXC10Q9NYD6 342 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 TMX2Q9Y320 296 aa10.15□□□□□ -0.79
MSL3-201ENST00000312196 RLFQ13129 1914 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 PARP14Q460N5 1801 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 ERC2O15083 957 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 PLCD1P51178 756 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 HDAC1Q13547 482 aaPredicted RBP10.14□□□□□ -0.79
MSL3-201ENST00000312196 APPBP2Q92624 585 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 ADAMTS5Q9UNA0 930 aa10.14□□□□□ -0.79
MSL3-201ENST00000312196 PLIN4Q96Q06 1357 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 RNF113AO15541 343 aaKnown RBP10.13□□□□□ -0.79
MSL3-201ENST00000312196 STRNO43815 780 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 SLURP2P0DP57 97 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 STRBPQ96SI9 672 aaKnown RBP10.13□□□□□ -0.79
MSL3-201ENST00000312196 APBA2Q99767 749 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 STAP2Q9UGK3 403 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 WDR46O15213 610 aaKnown RBP10.13□□□□□ -0.79
MSL3-201ENST00000312196 GDF11O95390 407 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 OLFML2BQ68BL8 750 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
MSL3-201ENST00000312196 ZNF287Q9HBT7 754 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 PCNTO95613 3336 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 SALL3Q9BXA9 1300 aa10.13□□□□□ -0.79
MSL3-201ENST00000312196 MBD4O95243 580 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 ELNP15502 786 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms