RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 ZSCAN25Q6NSZ9 544 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 RPAINQ86UA6 219 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 GOLGA5Q8TBA6 731 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CHAC2Q8WUX2 184 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SYTL4Q96C24 671 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 A1CFQ9NQ94 594 aaKnown RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SERTAD1Q9UHV2 236 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 TNRC6CQ9HCJ0 1690 aaKnown RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 NPHP4O75161 1426 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PEAK1Q9H792 1746 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 FIBPO43427 364 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 ZPR1O75312 459 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PYGLP06737 847 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 GNAI3P08754 354 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 MYBP10242 640 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 MAGEA10P43363 369 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CCZ1BP86790 482 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CCZ1P86791 482 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PLA2G4EQ3MJ16 856 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 TEX19Q8NA77 164 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 ENOX1Q8TC92 643 aaKnown RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 YIPF2Q9BWQ6 316 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PLEKHA4Q9H4M7 779 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 TRPC5Q9UL62 973 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PPT2Q9UMR5 302 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PIK3C2BO00750 1634 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 LAMB1P07942 1786 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 FAM86C2PA6NEL3 165 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SGSM2O43147 1006 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 AGR2O95994 175 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CTSHP09668 335 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 GPTP24298 496 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PIP4K2BP78356 416 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 FMR1Q06787 632 aaKnown RBP eCLIP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 SCRN1Q12765 414 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 PLEKHG4Q58EX7 1191 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 WLSQ5T9L3 541 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 C16orf86Q6ZW13 317 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 KIAA0825Q8IV33 1275 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CELF2-AS1Q8N7Q2 184 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 NGDNQ8NEJ9 315 aaKnown RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 MS4A3Q96HJ5 214 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CEP63Q96MT8 703 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 BRINP2Q9C0B6 783 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 RRP7BPQ9NSQ0 103 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 DIAPH3Q9NSV4 1193 aa3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 TSR3Q9UJK0 312 aaKnown RBP3.72□□□□□ -1.81
RAPGEF6-202ENST00000308008 CAMTA1Q9Y6Y1 1673 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ANKRD18BA2A2Z9 1011 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 IFRD1O00458 451 aaPredicted RBP3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 EXOC5O00471 708 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 POLR3GO15318 223 aaPredicted RBP3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 SKAP2O75563 359 aaPredicted RBP3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ACTN2P35609 894 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 MAP2K2P36507 400 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ATP6V1AP38606 617 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 EXOSC10Q01780 885 aaKnown RBP3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 NUCB1Q02818 461 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 TRDNQ13061 729 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ALG1LQ6GMV1 187 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ZBTB46Q86UZ6 589 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 CHCHD4Q8N4Q1 142 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 FBF1Q8TES7 1133 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 TSPY26PQ9H489 355 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 PDRG1Q9NUG6 133 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 IP6K2Q9UHH9 426 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 ZNF180Q9UJW8 692 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 POLIQ9UNA4 740 aa3.71□□□□□ -1.81
RAPGEF6-202ENST00000308008 TULP4Q9NRJ4 1543 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 CFAP69A5D8W1 941 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGA6CA6NDK9 693 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGA6BA6NDN3 693 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 KIF3CO14782 793 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 TLR3O15455 904 aaKnown RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 PRPF3O43395 683 aaKnown RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 PPP1R12BO60237 982 aaPredicted RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 PTCD1O75127 700 aaKnown RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGA6DP0CG33 693 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 MAPK9P45984 424 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 APOBRQ0VD83 1088 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 RAB33AQ14088 237 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 TTC31Q49AM3 519 aaPredicted RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 CCSAPQ6IQ19 270 aaPredicted RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 KANK3Q6NY19 840 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRIM74Q86UV6 250 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 TRIM73Q86UV7 250 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.71□□□□□ -1.821e-6■■■■□ 23
RAPGEF6-202ENST00000308008 KIRREL3Q8IZU9 778 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 CCT6BQ92526 530 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 ZKSCAN4Q969J2 545 aaPredicted RBP3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 GINM1Q9NU53 330 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 ETAA1Q9NY74 926 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 GOLGA6AQ9NYA3 693 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 SCINQ9Y6U3 715 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 ARHGAP5Q13017 1502 aa3.71□□□□□ -1.82
RAPGEF6-202ENST00000308008 RPGRIP1LQ68CZ1 1315 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms