RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 TUBE1Q9UJT0 475 aa12.8□□□□□ -0.36
IDH3A-201ENST00000299518 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
IDH3A-201ENST00000299518 PTPREP23469 700 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 UBASH3AP57075 661 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 E4F1Q66K89 784 aaPredicted RBP12.79□□□□□ -0.36
IDH3A-201ENST00000299518 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 MCM7P33993 719 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 TFAP4Q01664 338 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 RCSD1Q6JBY9 416 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 JMYQ8N9B5 988 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 MAPK8IP1Q9UQF2 711 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 LTBP4Q8N2S1 1624 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
IDH3A-201ENST00000299518 POSTNQ15063 836 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 SLC35G1Q2M3R5 365 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
IDH3A-201ENST00000299518 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
IDH3A-201ENST00000299518 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 A0A1B0GUL6 1792 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 CAVIN2O95810 425 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 TPM3P06753 285 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 CDC25BP30305 580 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-201ENST00000299518 TOM1O60784 492 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
IDH3A-201ENST00000299518 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 CEP135Q66GS9 1140 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
IDH3A-201ENST00000299518 ANAPC4Q9UJX5 808 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
IDH3A-201ENST00000299518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.36
IDH3A-201ENST00000299518 USP5P45974 858 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 PTGDRQ13258 359 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 IL17AQ16552 155 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 PHF20Q9BVI0 1012 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 MXD3Q9BW11 206 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 DUOX1Q9NRD9 1551 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 PP2D1A8MPX8 630 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.36
IDH3A-201ENST00000299518 VPS72Q15906 364 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 RILPL1Q5EBL4 403 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.36
IDH3A-201ENST00000299518 NFE2L3Q9Y4A8 694 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.36
IDH3A-201ENST00000299518 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.37
IDH3A-201ENST00000299518 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 CCDC196A0A1B0GTZ2 297 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 ACTN4O43707 911 aaKnown RBP12.77□□□□□ -0.37
IDH3A-201ENST00000299518 MYL5Q02045 173 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 TMTC3Q6ZXV5 915 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
IDH3A-201ENST00000299518 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 KRT2P35908 639 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 WASF1Q92558 559 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 UIMC1Q96RL1 719 aa12.77□□□□□ -0.37
IDH3A-201ENST00000299518 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
IDH3A-201ENST00000299518 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
IDH3A-201ENST00000299518 BTAF1O14981 1849 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 TRIM75PA6NK02 468 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 GPSM2P81274 684 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 DPYDQ12882 1025 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 A0A0U1RQJ8 604 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 FANCGO15287 622 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 NLRP5P59047 1200 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
IDH3A-201ENST00000299518 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
IDH3A-201ENST00000299518 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
IDH3A-201ENST00000299518 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
IDH3A-201ENST00000299518 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 CBX1P83916 185 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
IDH3A-201ENST00000299518 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
IDH3A-201ENST00000299518 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 RREB1Q92766 1687 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 TEX33O43247 280 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
IDH3A-201ENST00000299518 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 CYTH3O43739 400 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 PRR5LQ6MZQ0 368 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
IDH3A-201ENST00000299518 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
IDH3A-201ENST00000299518 PRPF3O43395 683 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms