RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 FAM207AQ9NSI2 230 aaPredicted RBP20.9■□□□□ 0.94
CASD1-201ENST00000297273 HLTFQ14527 1009 aaKnown RBP eCLIP20.89■□□□□ 0.94
CASD1-201ENST00000297273 ODF2Q5BJF6 829 aa20.89■□□□□ 0.94
CASD1-201ENST00000297273 SUSD4Q5VX71 490 aa20.89■□□□□ 0.94
CASD1-201ENST00000297273 TSGA10IPQ3SY00 556 aa20.89■□□□□ 0.93
CASD1-201ENST00000297273 RGS22Q8NE09 1264 aa20.89■□□□□ 0.93
CASD1-201ENST00000297273 CCDC42Q96M95 316 aa20.89■□□□□ 0.93
CASD1-201ENST00000297273 METTL16Q86W50 562 aaKnown RBP20.88■□□□□ 0.93
CASD1-201ENST00000297273 SLC35F6Q8N357 371 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 UBN2Q6ZU65 1347 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 COL15A1P39059 1388 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 CYP2D6P10635 497 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 PDE4DQ08499 809 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 CSGALNACT2Q8N6G5 542 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 FMR1Q06787 632 aaKnown RBP eCLIP20.88■□□□□ 0.93
CASD1-201ENST00000297273 ENGASEQ8NFI3 743 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 TGFBRAP1Q8WUH2 860 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 CTAGE1Q96RT6 745 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 CEP89Q96ST8 783 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 GPCPD1Q9NPB8 672 aa20.88■□□□□ 0.93
CASD1-201ENST00000297273 HPS5Q9UPZ3 1129 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 CCNT1O60563 726 aaKnown RBP20.87■□□□□ 0.93
CASD1-201ENST00000297273 GNAT2P19087 354 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 PAK1Q13153 545 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 UBE3CQ15386 1083 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 ZFYVE27Q5T4F4 411 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 TMCO5BA8MYB1 307 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 KIF20AO95235 890 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 PRPF4BQ13523 1007 aaKnown RBP20.87■□□□□ 0.93
CASD1-201ENST00000297273 IFT81Q8WYA0 676 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 DYNLL2Q96FJ2 89 aa20.87■□□□□ 0.93
CASD1-201ENST00000297273 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
CASD1-201ENST00000297273 ATP2C2O75185 946 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 MMP1P03956 469 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 MEX3CQ5U5Q3 659 aaKnown RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 SARM1Q6SZW1 724 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 BMP2KQ9NSY1 1161 aaPredicted RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 GDAQ9Y2T3 454 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 WTIPA6NIX2 430 aaPredicted RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 CIAO1O76071 339 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 ZSCAN10Q96SZ4 725 aaPredicted RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 PDE11AQ9HCR9 933 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 NLRC4Q9NPP4 1024 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 GPR108Q9NPR9 543 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 TFRCP02786 760 aaKnown RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 CDC25BP30305 580 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
CASD1-201ENST00000297273 CNGA4Q8IV77 575 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 VSTM4Q8IW00 320 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 CALML4Q96GE6 196 aa20.86■□□□□ 0.93
CASD1-201ENST00000297273 CYP27A1Q02318 531 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 TTC19Q6DKK2 380 aaPredicted RBP20.85■□□□□ 0.93
CASD1-201ENST00000297273 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.85■□□□□ 0.935e-7■■□□□ 13
CASD1-201ENST00000297273 TFR2Q9UP52 801 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 KIF20BQ96Q89 1820 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 PP2D1A8MPX8 630 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 LY9Q9HBG7 655 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 GNPATO15228 680 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 PNMA6AP0CW24 399 aaPredicted RBP20.85■□□□□ 0.93
CASD1-201ENST00000297273 HIBADHP31937 336 aaKnown RBP20.85■□□□□ 0.93
CASD1-201ENST00000297273 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
CASD1-201ENST00000297273 TRIM49BA6NDI0 452 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 ZEB2O60315 1214 aa20.85■□□□□ 0.93
CASD1-201ENST00000297273 NOC4LQ9BVI4 516 aaKnown RBP20.85■□□□□ 0.93
CASD1-201ENST00000297273 ZNF76P36508 570 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 NCAPH2Q6IBW4 605 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 CCDC43Q96MW1 224 aaKnown RBP20.84■□□□□ 0.93
CASD1-201ENST00000297273 C8orf37Q96NL8 207 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 ATG3Q9NT62 314 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 PSDA5PKW4 1024 aaPredicted RBP20.84■□□□□ 0.93
CASD1-201ENST00000297273 KIF5AQ12840 1032 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 NAPGQ99747 312 aaPredicted RBP20.84■□□□□ 0.93
CASD1-201ENST00000297273 CCDC87Q9NVE4 849 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 USP17L8P0C7I0 530 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 DIXDC1Q155Q3 683 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 NELFCDQ8IXH7 590 aa20.84■□□□□ 0.93
CASD1-201ENST00000297273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.84■□□□□ 0.93
CASD1-201ENST00000297273 BIN2Q9UBW5 565 aaPredicted RBP20.84■□□□□ 0.93
CASD1-201ENST00000297273 USO1O60763 962 aaKnown RBP20.83■□□□□ 0.93
CASD1-201ENST00000297273 TECP42680 631 aa20.83■□□□□ 0.93
CASD1-201ENST00000297273 PAFAH1B1P43034 410 aa20.83■□□□□ 0.93
CASD1-201ENST00000297273 POLD4Q9HCU8 107 aa20.83■□□□□ 0.93
CASD1-201ENST00000297273 WDR17Q8IZU2 1322 aa20.83■□□□□ 0.93
CASD1-201ENST00000297273 SRGAP2O75044 1071 aa20.83■□□□□ 0.92
CASD1-201ENST00000297273 IFNAR1P17181 557 aa20.83■□□□□ 0.92
CASD1-201ENST00000297273 CXCR5P32302 372 aa20.83■□□□□ 0.92
CASD1-201ENST00000297273 FMNL1O95466 1100 aaPredicted RBP20.83■□□□□ 0.92
CASD1-201ENST00000297273 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.92
CASD1-201ENST00000297273 FAM98CQ17RN3 349 aaKnown RBP20.83■□□□□ 0.92
CASD1-201ENST00000297273 TYW1BQ6NUM6 668 aa20.83■□□□□ 0.92
CASD1-201ENST00000297273 CEP112Q8N8E3 955 aa20.83■□□□□ 0.92
CASD1-201ENST00000297273 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
CASD1-201ENST00000297273 KCNJ18B7U540 433 aa20.82■□□□□ 0.92
CASD1-201ENST00000297273 LDHBP07195 334 aaKnown RBP20.82■□□□□ 0.92
CASD1-201ENST00000297273 ARID4AP29374 1257 aaPredicted RBP20.82■□□□□ 0.92
CASD1-201ENST00000297273 GABPB1Q06547 395 aaPredicted RBP20.82■□□□□ 0.92
CASD1-201ENST00000297273 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
CASD1-201ENST00000297273 TAX1BP1Q86VP1 789 aa20.82■□□□□ 0.92
CASD1-201ENST00000297273 RPGRQ92834 1020 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms