RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 DHX36Q9H2U1 1008 aaKnown RBP26.55■■□□□ 1.84
PTX3-201ENST00000295927 PLEKHA8P1O95397 391 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 GUCY1A2P33402 732 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 FUT2Q10981 343 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 EHD4Q9H223 541 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 TFIP11Q9UBB9 837 aaKnown RBP26.54■■□□□ 1.84
PTX3-201ENST00000295927 STX8Q9UNK0 236 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 LTBP3Q9NS15 1303 aa26.54■■□□□ 1.84
PTX3-201ENST00000295927 SPDYE2BA6NHP3 402 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 DEXIO95424 95 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 SPDYE6P0CI01 402 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 CIAPIN1Q6FI81 312 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 TMEM47Q9BQJ4 181 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 RNF26Q9BY78 433 aaPredicted RBP26.53■■□□□ 1.84
PTX3-201ENST00000295927 SPON1Q9HCB6 807 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 DDTLA6NHG4 134 aaPredicted RBP26.53■■□□□ 1.84
PTX3-201ENST00000295927 MBD3O95983 291 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 SHMT1P34896 483 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 DLGAP5Q15398 846 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 KRT40Q6A162 431 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 TMTC3Q6ZXV5 915 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 SH3BP5LQ7L8J4 393 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.53■■□□□ 1.84
PTX3-201ENST00000295927 TAOK2Q9UL54 1235 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 PLIN4Q96Q06 1357 aa26.53■■□□□ 1.84
PTX3-201ENST00000295927 RASSF7Q02833 373 aa26.52■■□□□ 1.84
PTX3-201ENST00000295927 CEP95Q96GE4 821 aa26.52■■□□□ 1.84
PTX3-201ENST00000295927 TRIM29Q14134 588 aa26.51■■□□□ 1.83
PTX3-201ENST00000295927 ZSCAN29Q8IWY8 852 aaPredicted RBP26.51■■□□□ 1.83
PTX3-201ENST00000295927 MAP3K14Q99558 947 aa26.51■■□□□ 1.83
PTX3-201ENST00000295927 SCAND2PQ9GZW5 306 aaPredicted RBP26.51■■□□□ 1.83
PTX3-201ENST00000295927 ENTPD3O75355 529 aa26.51■■□□□ 1.83
PTX3-201ENST00000295927 AKR1B1P15121 316 aa26.51■■□□□ 1.83
PTX3-201ENST00000295927 PI4KBQ9UBF8 816 aa26.51■■□□□ 1.83
PTX3-201ENST00000295927 SLURP2P0DP57 97 aa26.5■■□□□ 1.83
PTX3-201ENST00000295927 KIF5BP33176 963 aa26.5■■□□□ 1.83
PTX3-201ENST00000295927 NOVP48745 357 aa26.5■■□□□ 1.83
PTX3-201ENST00000295927 KIF23Q02241 960 aaPredicted RBP26.5■■□□□ 1.83
PTX3-201ENST00000295927 PRPF3O43395 683 aaKnown RBP26.49■■□□□ 1.83
PTX3-201ENST00000295927 UBE2HP62256 183 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 AKAP17AQ02040 695 aaKnown RBP26.49■■□□□ 1.83
PTX3-201ENST00000295927 CAVIN1Q6NZI2 390 aaKnown RBP26.49■■□□□ 1.83
PTX3-201ENST00000295927 SRBD1Q8N5C6 995 aaKnown RBP26.49■■□□□ 1.83
PTX3-201ENST00000295927 DNAJC18Q9H819 358 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 ELP1O95163 1332 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 KIF28PB7ZC32 967 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 PRELPP51888 382 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 GRM4Q14833 912 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 TNIP1Q15025 636 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 LEO1Q8WVC0 666 aaPredicted RBP26.49■■□□□ 1.83
PTX3-201ENST00000295927 SPATA32Q96LK8 384 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 TMOD2Q9NZR1 351 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 CFAP45Q9UL16 551 aa26.49■■□□□ 1.83
PTX3-201ENST00000295927 ATRNL1Q5VV63 1379 aa26.48■■□□□ 1.83
PTX3-201ENST00000295927 CNTNAP5Q8WYK1 1306 aa26.48■■□□□ 1.83
PTX3-201ENST00000295927 BRAPQ7Z569 592 aa26.48■■□□□ 1.83
PTX3-201ENST00000295927 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
PTX3-201ENST00000295927 ZNF70Q9UC06 446 aaPredicted RBP26.48■■□□□ 1.83
PTX3-201ENST00000295927 V9GY48 417 aaPredicted RBP26.48■■□□□ 1.83
PTX3-201ENST00000295927 COL2A1P02458 1487 aaPredicted RBP26.48■■□□□ 1.83
PTX3-201ENST00000295927 GREB1LQ9C091 1923 aaPredicted RBP26.48■■□□□ 1.83
PTX3-201ENST00000295927 IGKV6D-41A0A0C4DH26 115 aa26.47■■□□□ 1.83
PTX3-201ENST00000295927 CLRN2A0PK11 232 aa26.47■■□□□ 1.83
PTX3-201ENST00000295927 TOP1P11387 765 aaKnown RBP26.47■■□□□ 1.83
PTX3-201ENST00000295927 PKN1Q16512 942 aa26.47■■□□□ 1.83
PTX3-201ENST00000295927 ATL3Q6DD88 541 aa26.47■■□□□ 1.83
PTX3-201ENST00000295927 ZNF396Q96N95 335 aaPredicted RBP26.47■■□□□ 1.83
PTX3-201ENST00000295927 MTMR4Q9NYA4 1195 aa26.47■■□□□ 1.83
PTX3-201ENST00000295927 FOXP4Q8IVH2 680 aaPredicted RBP26.47■■□□□ 1.83
PTX3-201ENST00000295927 hCG_1642624A0A1W2PR95 340 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 FAM196BA6NMK8 535 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 TCP10L2B9ZVM9 353 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 SPDYE2Q495Y8 402 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 STAG2Q8N3U4 1231 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 RBM27Q9P2N5 1060 aaKnown RBP26.46■■□□□ 1.83
PTX3-201ENST00000295927 MAD2L2Q9UI95 211 aa26.46■■□□□ 1.83
PTX3-201ENST00000295927 BAZ2BQ9UIF8 2168 aaKnown RBP26.46■■□□□ 1.83
PTX3-201ENST00000295927 TPRNQ4KMQ1 711 aa26.45■■□□□ 1.83
PTX3-201ENST00000295927 CCDC17Q96LX7 622 aa26.45■■□□□ 1.83
PTX3-201ENST00000295927 USP28Q96RU2 1077 aa26.45■■□□□ 1.83
PTX3-201ENST00000295927 MTMR7Q9Y216 660 aa26.45■■□□□ 1.83
PTX3-201ENST00000295927 CEBPZQ03701 1054 aaKnown RBP26.45■■□□□ 1.82
PTX3-201ENST00000295927 TRIM34Q9BYJ4 488 aa26.45■■□□□ 1.82
PTX3-201ENST00000295927 FTOQ9C0B1 505 aaKnown RBP eCLIP26.45■■□□□ 1.82
PTX3-201ENST00000295927 KCNJ14Q9UNX9 436 aa26.45■■□□□ 1.82
PTX3-201ENST00000295927 MMP1P03956 469 aa26.44■■□□□ 1.82
PTX3-201ENST00000295927 GNAQP50148 359 aa26.44■■□□□ 1.82
PTX3-201ENST00000295927 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
PTX3-201ENST00000295927 ZBED3Q96IU2 234 aaPredicted RBP26.44■■□□□ 1.82
PTX3-201ENST00000295927 MPHOSPH10O00566 681 aaKnown RBP26.43■■□□□ 1.82
PTX3-201ENST00000295927 MYSM1Q5VVJ2 828 aa26.43■■□□□ 1.82
PTX3-201ENST00000295927 TMEM63CQ9P1W3 806 aa26.43■■□□□ 1.82
PTX3-201ENST00000295927 SHTN1A0MZ66 631 aa26.43■■□□□ 1.82
PTX3-201ENST00000295927 PALM3A6NDB9 673 aaPredicted RBP26.43■■□□□ 1.82
PTX3-201ENST00000295927 FZD9O00144 591 aa26.43■■□□□ 1.82
PTX3-201ENST00000295927 U2AF2P26368 475 aaKnown RBP eCLIP26.43■■□□□ 1.82
PTX3-201ENST00000295927 GNL2Q13823 731 aaKnown RBP26.43■■□□□ 1.82
PTX3-201ENST00000295927 MYH4Q9Y623 1939 aa26.42■■□□□ 1.82
PTX3-201ENST00000295927 RPS12P25398 132 aaKnown RBP26.42■■□□□ 1.82
PTX3-201ENST00000295927 EIF6P56537 245 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms