RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CCDC40Q4G0X9 1142 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 C6orf163Q5TEZ5 329 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 XAGE2Q96GT9 111 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 FSD2A1L4K1 749 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 TNNI3KQ59H18 835 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 NCOA7Q8NI08 942 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 BRF1Q92994 677 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 FPGT-TNNI3KV9GXZ4 949 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 HOOK2Q96ED9 719 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 NSRP1Q9H0G5 558 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 CTAGE9A4FU28 777 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 MATR3P43243 847 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 METAP2P50579 478 aaKnown RBP eCLIP13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 CCDC155Q8N6L0 562 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 MKNK2Q9HBH9 465 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
SYNGAP1-201ENST00000293748 BAG3O95817 575 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 DDX12PQ92771 950 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 POLA2Q14181 598 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 RSBN1LQ6PCB5 846 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 GMPSP49915 693 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 CXCL9Q07325 125 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 NBPF11Q86T75 865 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 ERO1AQ96HE7 468 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 ADARB2Q9NS39 739 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 RANBP6O60518 1105 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 PTGS1P23219 599 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 EPHX2P34913 555 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 TTC31Q49AM3 519 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 C15orf52Q6ZUT6 534 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 TRIM47Q96LD4 638 aa13.39□□□□□ -0.27
SYNGAP1-201ENST00000293748 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 DPF2Q92785 391 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 RASSF4Q9H2L5 321 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 TACC1O75410 805 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 IDEP14735 1019 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 TIMM10P62072 90 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 MICALL1Q8N3F8 863 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 FBF1Q8TES7 1133 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 RRAGDQ9NQL2 400 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 PSMD14O00487 310 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 SASH1O94885 1247 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 PLCG2P16885 1265 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
SYNGAP1-201ENST00000293748 KIF5BP33176 963 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 OTUD6BQ8N6M0 293 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 KAZALD1Q96I82 304 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 RBM8AQ9Y5S9 174 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 BCAMP50895 628 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 KRT83P78385 493 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 IGSF3O75054 1194 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZFP91Q96JP5 570 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 VEZTQ9HBM0 779 aa13.37□□□□□ -0.27
SYNGAP1-201ENST00000293748 KRT86O43790 486 aa13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 RFX5P48382 616 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 USP50Q70EL3 339 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 MACROD2A1Z1Q3 448 aa13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 KLF18A0A0U1RQI7 1052 aa13.36□□□□□ -0.27
SYNGAP1-201ENST00000293748 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms