RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MINPP1Q9UNW1 487 aa28.72■■■□□ 2.19
ROM1-201ENST00000278833 CCDC88AQ3V6T2 1871 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 ORC4O43929 436 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 PRKCSHP14314 528 aaPredicted RBP28.71■■■□□ 2.19
ROM1-201ENST00000278833 LMOD1P29536 600 aaPredicted RBP28.71■■■□□ 2.19
ROM1-201ENST00000278833 PDCL2Q8N4E4 241 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 SDR42E1Q8WUS8 393 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 PHF20Q9BVI0 1012 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.71■■■□□ 2.19
ROM1-201ENST00000278833 TAF1P21675 1872 aa28.71■■■□□ 2.19
ROM1-201ENST00000278833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.7■■■□□ 2.19
ROM1-201ENST00000278833 GYG1P46976 350 aa28.7■■■□□ 2.19
ROM1-201ENST00000278833 VSTM4Q8IW00 320 aa28.7■■■□□ 2.19
ROM1-201ENST00000278833 FAM84BQ96KN1 310 aaPredicted RBP28.7■■■□□ 2.19
ROM1-201ENST00000278833 TMX1Q9H3N1 280 aa28.7■■■□□ 2.19
ROM1-201ENST00000278833 AATFQ9NY61 560 aaKnown RBP eCLIP28.7■■■□□ 2.19
ROM1-201ENST00000278833 MORC3Q14149 939 aa28.7■■■□□ 2.18
ROM1-201ENST00000278833 PKN1Q16512 942 aa28.7■■■□□ 2.18
ROM1-201ENST00000278833 FCHSD1Q86WN1 690 aa28.7■■■□□ 2.18
ROM1-201ENST00000278833 MAN1B1Q9UKM7 699 aa28.7■■■□□ 2.18
ROM1-201ENST00000278833 UBASH3AP57075 661 aa28.69■■■□□ 2.18
ROM1-201ENST00000278833 C3orf67Q6ZVT6 689 aa28.69■■■□□ 2.18
ROM1-201ENST00000278833 COL23A1Q86Y22 540 aaPredicted RBP28.69■■■□□ 2.18
ROM1-201ENST00000278833 KIF18AQ8NI77 898 aa28.69■■■□□ 2.18
ROM1-201ENST00000278833 ABCF2Q9UG63 623 aa28.69■■■□□ 2.18
ROM1-201ENST00000278833 PCDHB6Q9Y5E3 794 aa28.69■■■□□ 2.18
ROM1-201ENST00000278833 ACTN4O43707 911 aaKnown RBP28.68■■■□□ 2.18
ROM1-201ENST00000278833 ATP1A3P13637 1013 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 BMP6P22004 513 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 CATIPQ7Z7H3 387 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 ENOX1Q8TC92 643 aaKnown RBP28.68■■■□□ 2.18
ROM1-201ENST00000278833 NUP133Q8WUM0 1156 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 MINDY4BA8MYZ0 360 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 AKAP17AQ02040 695 aaKnown RBP28.68■■■□□ 2.18
ROM1-201ENST00000278833 NR5A1Q13285 461 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 IQCA1Q86XH1 822 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 ZNF384Q8TF68 577 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 PPP1R13BQ96KQ4 1090 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 NYXQ9GZU5 481 aa28.68■■■□□ 2.18
ROM1-201ENST00000278833 KRT2P35908 639 aa28.67■■■□□ 2.18
ROM1-201ENST00000278833 TROAPQ12815 778 aa28.67■■■□□ 2.18
ROM1-201ENST00000278833 SHISA4Q96DD7 197 aa28.67■■■□□ 2.18
ROM1-201ENST00000278833 ZNF18P17022 549 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 TRAPPC3LQ5T215 181 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 IFIT1BQ5T764 474 aaKnown RBP28.66■■■□□ 2.18
ROM1-201ENST00000278833 CCDC34Q96HJ3 373 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 QSER1Q2KHR3 1735 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 TRIM75PA6NK02 468 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 SBK1Q52WX2 424 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 TMTC3Q6ZXV5 915 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 OXER1Q8TDS5 423 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 ARHGEF1Q92888 912 aaKnown RBP28.66■■■□□ 2.18
ROM1-201ENST00000278833 TNFRSF25Q93038 417 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 SMARCE1Q969G3 411 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 FERMT2Q96AC1 680 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 NSUN4Q96CB9 384 aaKnown RBP28.66■■■□□ 2.18
ROM1-201ENST00000278833 L2HGDHQ9H9P8 463 aa28.66■■■□□ 2.18
ROM1-201ENST00000278833 SERPINC1P01008 464 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 GRIN1Q05586 938 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 CTR9Q6PD62 1173 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 FLAD1Q8NFF5 587 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 ANKRD2Q9GZV1 360 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 CGNQ9P2M7 1197 aaKnown RBP28.65■■■□□ 2.18
ROM1-201ENST00000278833 SERTAD1Q9UHV2 236 aa28.65■■■□□ 2.18
ROM1-201ENST00000278833 ERCC5P28715 1186 aaPredicted RBP28.64■■■□□ 2.18
ROM1-201ENST00000278833 SMAP1Q8IYB5 467 aaPredicted RBP28.64■■■□□ 2.18
ROM1-201ENST00000278833 DPF2Q92785 391 aa28.64■■■□□ 2.18
ROM1-201ENST00000278833 ERO1AQ96HE7 468 aa28.64■■■□□ 2.18
ROM1-201ENST00000278833 IQSEC3Q9UPP2 1182 aaPredicted RBP28.64■■■□□ 2.18
ROM1-201ENST00000278833 POLR2DO15514 142 aaKnown RBP28.63■■■□□ 2.17
ROM1-201ENST00000278833 ADRA2BP18089 450 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 PDE4BQ07343 736 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 TBX2Q13207 712 aaPredicted RBP28.63■■■□□ 2.17
ROM1-201ENST00000278833 ISM2Q6H9L7 571 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 FEZ1Q99689 392 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 ATP8A2Q9NTI2 1148 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 FANCLQ9NW38 375 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 CNTNAP5Q8WYK1 1306 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 DYNLL1P63167 89 aaKnown RBP28.63■■■□□ 2.17
ROM1-201ENST00000278833 SH3RF1Q7Z6J0 888 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 BRMS1Q9HCU9 246 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 CABP5Q9NP86 173 aa28.63■■■□□ 2.17
ROM1-201ENST00000278833 FOXN1O15353 648 aa28.62■■■□□ 2.17
ROM1-201ENST00000278833 CFAP100Q494V2 611 aa28.62■■■□□ 2.17
ROM1-201ENST00000278833 CELF1Q92879 486 aaKnown RBP28.62■■■□□ 2.17
ROM1-201ENST00000278833 CSRNP2Q9H175 543 aa28.62■■■□□ 2.17
ROM1-201ENST00000278833 TRMT1Q9NXH9 659 aaKnown RBP28.62■■■□□ 2.17
ROM1-201ENST00000278833 ARPP21Q9UBL0 812 aaPredicted RBP28.62■■■□□ 2.17
ROM1-201ENST00000278833 NARFQ9UHQ1 456 aa28.62■■■□□ 2.17
ROM1-201ENST00000278833 CMTR1Q8N1G2 835 aaKnown RBP28.61■■■□□ 2.17
ROM1-201ENST00000278833 CRNKL1Q9BZJ0 848 aaKnown RBP28.61■■■□□ 2.17
ROM1-201ENST00000278833 INTS13Q9NVM9 706 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 PRR29P0C7W0 189 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 TRAPPC10P48553 1259 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 PLCD1P51178 756 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 NPY5RQ15761 445 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 PPP4R3BQ5MIZ7 849 aa28.61■■■□□ 2.17
ROM1-201ENST00000278833 PHLPP2Q6ZVD8 1323 aa28.6■■■□□ 2.17
ROM1-201ENST00000278833 IRS2Q9Y4H2 1338 aa28.6■■■□□ 2.17
ROM1-201ENST00000278833 TOP1P11387 765 aaKnown RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 293.2 ms