RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 PAGE5Q96GU1 130 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 ARGLU1Q9NWB6 273 aaPredicted RBP25.23■■□□□ 1.63
CDR2-201ENST00000268383 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 ADAMTS3O15072 1205 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 AKAP17AQ02040 695 aaKnown RBP25.23■■□□□ 1.63
CDR2-201ENST00000268383 DACH1Q9UI36 760 aa25.23■■□□□ 1.63
CDR2-201ENST00000268383 A0A1B0GTH6 734 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 MYO1BO43795 1136 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 ABL1P00519 1130 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 CHRNDQ07001 517 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 IGSF22Q8N9C0 903 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 XIRP1Q702N8 1843 aaKnown RBP25.22■■□□□ 1.63
CDR2-201ENST00000268383 BAZ2AQ9UIF9 1905 aaKnown RBP25.22■■□□□ 1.63
CDR2-201ENST00000268383 CCDC196A0A1B0GTZ2 297 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 ZNF579Q8NAF0 562 aaKnown RBP25.22■■□□□ 1.63
CDR2-201ENST00000268383 SPATA20Q8TB22 786 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 SRRTQ9BXP5 876 aaKnown RBP25.22■■□□□ 1.63
CDR2-201ENST00000268383 BCL9O00512 1426 aa25.22■■□□□ 1.63
CDR2-201ENST00000268383 AKR1B15C9JRZ8 316 aaPredicted RBP25.21■■□□□ 1.63
CDR2-201ENST00000268383 VEGFAP15692 232 aaPredicted RBP25.21■■□□□ 1.63
CDR2-201ENST00000268383 CCT6AP40227 531 aaKnown RBP25.21■■□□□ 1.63
CDR2-201ENST00000268383 PNPLA7Q6ZV29 1317 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 DOCK2Q92608 1830 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 COL4A1P02462 1669 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 NMT2O60551 498 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 SLC4A8Q2Y0W8 1093 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 ELOA2Q8IYF1 753 aaPredicted RBP25.21■■□□□ 1.63
CDR2-201ENST00000268383 SYNRGQ9UMZ2 1314 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 TBC1D8O95759 1140 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 CDC25AP30304 524 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 PUF60Q9UHX1 559 aaKnown RBP25.21■■□□□ 1.63
CDR2-201ENST00000268383 CEP131Q9UPN4 1083 aa25.21■■□□□ 1.63
CDR2-201ENST00000268383 NID2Q14112 1375 aa25.2■■□□□ 1.63
CDR2-201ENST00000268383 ERVV-1B6SEH8 477 aa25.2■■□□□ 1.62
CDR2-201ENST00000268383 GNAT2P19087 354 aa25.2■■□□□ 1.62
CDR2-201ENST00000268383 IL6STP40189 918 aaPredicted RBP25.2■■□□□ 1.62
CDR2-201ENST00000268383 PARD6BQ9BYG5 372 aa25.2■■□□□ 1.62
CDR2-201ENST00000268383 CASP14P31944 242 aa25.2■■□□□ 1.62
CDR2-201ENST00000268383 CUL4BQ13620 913 aa25.2■■□□□ 1.62
CDR2-201ENST00000268383 CC2D1AQ6P1N0 951 aaPredicted RBP25.2■■□□□ 1.62
CDR2-201ENST00000268383 KRT2P35908 639 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 TRIML1Q8N9V2 468 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 CTNND2Q9UQB3 1225 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 TIAM2Q8IVF5 1701 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 MAGEB6P1A0A0J9YX57 407 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 IGHMBP2P38935 993 aaKnown RBP25.19■■□□□ 1.62
CDR2-201ENST00000268383 FUT2Q10981 343 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 TMTC2Q8N394 836 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 ESR2Q92731 530 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 PHF20Q9BVI0 1012 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 RNF41Q9H4P4 317 aaPredicted RBP25.19■■□□□ 1.62
CDR2-201ENST00000268383 AATFQ9NY61 560 aaKnown RBP eCLIP25.19■■□□□ 1.62
CDR2-201ENST00000268383 MAPK8IP1Q9UQF2 711 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 MYH8P13535 1937 aa25.19■■□□□ 1.62
CDR2-201ENST00000268383 ACSBG1Q96GR2 724 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 RNF26Q9BY78 433 aaPredicted RBP25.18■■□□□ 1.62
CDR2-201ENST00000268383 PPP1R3GB7ZBB8 358 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 ERCC5P28715 1186 aaPredicted RBP25.18■■□□□ 1.62
CDR2-201ENST00000268383 FXR1P51114 621 aaKnown RBP eCLIP25.18■■□□□ 1.62
CDR2-201ENST00000268383 GYS2P54840 703 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 IFIT1BQ5T764 474 aaKnown RBP25.18■■□□□ 1.62
CDR2-201ENST00000268383 SPATA1Q5VX52 437 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 KANK3Q6NY19 840 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 PPFIBP1Q86W92 1011 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 ZSCAN10Q96SZ4 725 aaPredicted RBP25.18■■□□□ 1.62
CDR2-201ENST00000268383 ADD3Q9UEY8 706 aaKnown RBP25.18■■□□□ 1.62
CDR2-201ENST00000268383 ADGRG1Q9Y653 693 aa25.18■■□□□ 1.62
CDR2-201ENST00000268383 RNF225M0QZC1 329 aaPredicted RBP25.17■■□□□ 1.62
CDR2-201ENST00000268383 CCDC175P0C221 793 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 RSRC2Q7L4I2 434 aaKnown RBP25.17■■□□□ 1.62
CDR2-201ENST00000268383 ACRBPQ8NEB7 543 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 TAF1P21675 1872 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 ZBTB22O15209 634 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 PTGDRQ13258 359 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 NIP7Q9Y221 180 aaKnown RBP eCLIP25.17■■□□□ 1.62
CDR2-201ENST00000268383 BCORQ6W2J9 1755 aa25.17■■□□□ 1.62
CDR2-201ENST00000268383 EIF5P55010 431 aaKnown RBP25.16■■□□□ 1.62
CDR2-201ENST00000268383 ST5P78524 1137 aa25.16■■□□□ 1.62
CDR2-201ENST00000268383 NPY5RQ15761 445 aa25.16■■□□□ 1.62
CDR2-201ENST00000268383 INTS5Q6P9B9 1019 aaKnown RBP25.16■■□□□ 1.62
CDR2-201ENST00000268383 GOLGA6L9A6NEM1 432 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 CCDC152Q4G0S7 254 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 FAM47AQ5JRC9 791 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 C3orf67Q6ZVT6 689 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 SH3RF1Q7Z6J0 888 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 ZNF384Q8TF68 577 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 VPS16Q9H269 839 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 ARAP2Q8WZ64 1704 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 LRP5O75197 1615 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 GYPCP04921 128 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 CDC5LQ99459 802 aaKnown RBP25.15■■□□□ 1.62
CDR2-201ENST00000268383 XDHP47989 1333 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
CDR2-201ENST00000268383 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
CDR2-201ENST00000268383 ZNF569Q5MCW4 686 aa25.14■■□□□ 1.62
CDR2-201ENST00000268383 GPR161Q8N6U8 529 aaKnown RBP25.14■■□□□ 1.62
CDR2-201ENST00000268383 NEK11Q8NG66 645 aa25.14■■□□□ 1.62
CDR2-201ENST00000268383 RIOK1Q9BRS2 568 aaKnown RBP25.14■■□□□ 1.62
CDR2-201ENST00000268383 OAS2P29728 719 aaKnown RBP25.14■■□□□ 1.62
CDR2-201ENST00000268383 CRKLP46109 303 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms