RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 VWCEQ96DN2 955 aa6.93□□□□□ -1.3
CCDC54-201ENST00000261058 DUSP23Q9BVJ7 150 aa6.93□□□□□ -1.3
CCDC54-201ENST00000261058 KCNF1Q9H3M0 494 aa6.93□□□□□ -1.3
CCDC54-201ENST00000261058 PRDM10Q9NQV6 1147 aa6.93□□□□□ -1.3
CCDC54-201ENST00000261058 SLC12A7Q9Y666 1083 aa6.93□□□□□ -1.3
CCDC54-201ENST00000261058 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 POLR2BP30876 1174 aaKnown RBP6.92□□□□□ -1.3
CCDC54-201ENST00000261058 CDK5R2Q13319 367 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 NKAPLQ5M9Q1 402 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 FAM214BQ7L5A3 538 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 ZAR1Q86SH2 424 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 KIF2CQ99661 725 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 LNPKQ9C0E8 428 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 ACTR10Q9NZ32 417 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 STOML1Q9UBI4 398 aa6.92□□□□□ -1.3
CCDC54-201ENST00000261058 EOMESO95936 686 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 ADMP35318 185 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 NFKBIBQ15653 356 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 LETMD1Q6P1Q0 360 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 PHACTR4Q8IZ21 702 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
CCDC54-201ENST00000261058 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 MSRB2Q9Y3D2 182 aa6.91□□□□□ -1.3
CCDC54-201ENST00000261058 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 DPH6Q7L8W6 267 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 TMEM192Q8IY95 271 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 CELF2-AS1Q8N7Q2 184 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 RIN3Q8TB24 985 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 MKL1Q969V6 931 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 MIPEPQ99797 713 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.9□□□□□ -1.31
CCDC54-201ENST00000261058 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.31
CCDC54-201ENST00000261058 LGR6Q9HBX8 967 aa6.9□□□□□ -1.31
CCDC54-201ENST00000261058 ZNF214Q9UL59 606 aaPredicted RBP6.9□□□□□ -1.31
CCDC54-201ENST00000261058 DDR2Q16832 855 aa6.89□□□□□ -1.31
CCDC54-201ENST00000261058 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
CCDC54-201ENST00000261058 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
CCDC54-201ENST00000261058 XAGE3Q8WTP9 111 aa6.89□□□□□ -1.31
CCDC54-201ENST00000261058 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
CCDC54-201ENST00000261058 SUCOQ9UBS9 1254 aaKnown RBP6.89□□□□□ -1.31
CCDC54-201ENST00000261058 LEFTY1O75610 366 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 PMS1P54277 932 aaKnown RBP6.88□□□□□ -1.31
CCDC54-201ENST00000261058 NFIAQ12857 509 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 C22orf34Q6ZV56 151 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 LRP10Q7Z4F1 713 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 TOP6BLQ8N6T0 577 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 KLHL6Q8WZ60 621 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 DHRS1Q96LJ7 313 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 SLC6A18Q96N87 628 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
CCDC54-201ENST00000261058 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 GBP1P32455 592 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 ETV3P41162 512 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 DOC2BQ14184 412 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 PPP2R5EQ16537 467 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 FXNQ16595 210 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 ZNF746Q6NUN9 644 aaPredicted RBP6.87□□□□□ -1.31
CCDC54-201ENST00000261058 SLC51AQ86UW1 340 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 GIMAP7Q8NHV1 300 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 COX4I2Q96KJ9 171 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 CNTNAP4Q9C0A0 1308 aa6.87□□□□□ -1.31
CCDC54-201ENST00000261058 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 GSC2O15499 205 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 F13BP05160 661 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 RASA3Q14644 834 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 CPSF6Q16630 551 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 CCDC144BQ3MJ40 725 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 NBPF12Q5TAG4 269 aaPredicted RBP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 CDH24Q86UP0 819 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 RNF141Q8WVD5 230 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 SMARCC1Q92922 1105 aaPredicted RBP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 TRIM55Q9BYV6 548 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 MAPK8IP1Q9UQF2 711 aa6.86□□□□□ -1.31
CCDC54-201ENST00000261058 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
CCDC54-201ENST00000261058 CLEC3AO75596 197 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 FSTP19883 344 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 NCAPHQ15003 741 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 MRM1Q6IN84 353 aaKnown RBP6.85□□□□□ -1.31
CCDC54-201ENST00000261058 ZNF765Q7L2R6 523 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 MFSD14AQ96MC6 490 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 CCDC113Q9H0I3 377 aa6.85□□□□□ -1.31
CCDC54-201ENST00000261058 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 C9IYK1 514 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 DYRK3O43781 588 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 GJB6O95452 261 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 IGLV1-40P01703 118 aa6.84□□□□□ -1.31
CCDC54-201ENST00000261058 ZNF865P0CJ78 1059 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms