RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 MTMR4Q9NYA4 1195 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
VPS25-201ENST00000253794 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.25
VPS25-201ENST00000253794 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
VPS25-201ENST00000253794 CXCL11O14625 94 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 PSMA5P28066 241 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 GJA5P36382 358 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 ICA1Q05084 483 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.25
VPS25-201ENST00000253794 SPRYD7Q5W111 196 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 CYB5R4Q7L1T6 521 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 MKL1Q969V6 931 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 CEP95Q96GE4 821 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 TTC14Q96N46 770 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 UPF2Q9HAU5 1272 aaKnown RBP16.64■□□□□ 0.25
VPS25-201ENST00000253794 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.25
VPS25-201ENST00000253794 ZHX2Q9Y6X8 837 aa16.64■□□□□ 0.25
VPS25-201ENST00000253794 MCM5P33992 734 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
VPS25-201ENST00000253794 ANTXR2P58335 489 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
VPS25-201ENST00000253794 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 DEFB115Q30KQ5 88 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 DGKHQ86XP1 1220 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
VPS25-201ENST00000253794 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
VPS25-201ENST00000253794 IRF6O14896 467 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 TTLL1O95922 423 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
VPS25-201ENST00000253794 SEC23AQ15436 765 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
VPS25-201ENST00000253794 OTUD5Q96G74 571 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 C12orf42Q96LP6 360 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
VPS25-201ENST00000253794 A0A0G2JLL6 359 aaPredicted RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 A0A1W2PRG0 241 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 C19orf81C9J6K1 198 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 BACE1P56817 501 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 PRRT2Q7Z6L0 340 aaPredicted RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 MS4A4AQ96JQ5 239 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 TMEM87BQ96K49 555 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 JAKMIP1Q96N16 626 aaKnown RBP16.61■□□□□ 0.25
VPS25-201ENST00000253794 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
VPS25-201ENST00000253794 PRC1O43663 620 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 NMT2O60551 498 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 ECE1P42892 770 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 GTF2A2P52657 109 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 USP14P54578 494 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 SPP2Q13103 211 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 NOGQ13253 232 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 MOGSQ13724 837 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 KIF2CQ99661 725 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 AGXT2Q9BYV1 514 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 TNKSO95271 1327 aa16.6■□□□□ 0.25
VPS25-201ENST00000253794 LOC285556D6RIA3 1793 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 PTPRFP10586 1907 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 SH2B2O14492 632 aaPredicted RBP16.59■□□□□ 0.25
VPS25-201ENST00000253794 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
VPS25-201ENST00000253794 LIFRP42702 1097 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
VPS25-201ENST00000253794 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
VPS25-201ENST00000253794 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
VPS25-201ENST00000253794 STX8Q9UNK0 236 aa16.59■□□□□ 0.25
VPS25-201ENST00000253794 MANSC4A6NHS7 340 aaPredicted RBP16.58■□□□□ 0.24
VPS25-201ENST00000253794 CETPP11597 493 aa16.58■□□□□ 0.24
VPS25-201ENST00000253794 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
VPS25-201ENST00000253794 INHBEP58166 350 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms