RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ADKP55263 362 aaKnown RBP21.57■■□□□ 1.04
SNX4-201ENST00000251775 PPARAQ07869 468 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 HSP90AA4PQ58FG1 418 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 RESP18Q5W5W9 173 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 LCMT1Q9UIC8 334 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 COL1A1P02452 1464 aaPredicted RBP21.57■■□□□ 1.04
SNX4-201ENST00000251775 CCDC151A5D8V7 595 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 MAP2K7O14733 419 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 RTN1Q16799 776 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 JMYQ8N9B5 988 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 PCDHA5Q9Y5H7 936 aa21.57■■□□□ 1.04
SNX4-201ENST00000251775 NUTM2BA6NNL0 878 aaPredicted RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 NUTM2EB1AL46 878 aaPredicted RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 PDE4CQ08493 712 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 NUTM2AQ8IVF1 878 aaPredicted RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 CMTR1Q8N1G2 835 aaKnown RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 BTBD18B2RXH4 712 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 SART3Q15020 963 aaKnown RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 JAKMIP3Q5VZ66 844 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 ANKRD18AQ8IVF6 992 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 CCDC82Q8N4S0 544 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 GOLGA5Q8TBA6 731 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 DESI2Q9BSY9 194 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.56■■□□□ 1.04
SNX4-201ENST00000251775 KCNJ14Q9UNX9 436 aa21.56■■□□□ 1.04
SNX4-201ENST00000251775 MYH2Q9UKX2 1941 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 LMAN1P49257 510 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 SMARCC1Q92922 1105 aaPredicted RBP21.55■■□□□ 1.04
SNX4-201ENST00000251775 RAI14Q9P0K7 980 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 BAZ2AQ9UIF9 1905 aaKnown RBP21.55■■□□□ 1.04
SNX4-201ENST00000251775 MINDY4BA8MYZ0 360 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 MYO1CO00159 1063 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 MMP1P03956 469 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 KARSQ15046 597 aaKnown RBP21.55■■□□□ 1.04
SNX4-201ENST00000251775 BRD3Q15059 726 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 SPECC1LQ69YQ0 1117 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 CLEC4GQ6UXB4 293 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 LINC00116Q8NCU8 138 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 WASF1Q92558 559 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 RASSF4Q9H2L5 321 aa21.55■■□□□ 1.04
SNX4-201ENST00000251775 MYH6P13533 1939 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 ERICH2A1L162 156 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 KCNQ4P56696 695 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 NOSTRINQ8IVI9 506 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 CCDC12Q8WUD4 166 aaPredicted RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 RNF41Q9H4P4 317 aaPredicted RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 MRPL44Q9H9J2 332 aaKnown RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 MAGEB6P1A0A0J9YX57 407 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 TRIM66O15016 1216 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 TOB1P50616 345 aaPredicted RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 SF3B3Q15393 1217 aaKnown RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 DIS3L2Q8IYB7 885 aaKnown RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 CRACR2BQ8N4Y2 399 aaPredicted RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 CNNM3Q8NE01 707 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 MTA3Q9BTC8 594 aa21.54■■□□□ 1.04
SNX4-201ENST00000251775 IRX2Q9BZI1 471 aaPredicted RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 CWC15Q9P013 229 aaKnown RBP21.54■■□□□ 1.04
SNX4-201ENST00000251775 FOXN1O15353 648 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 CUTAO60888 179 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 ZNF18P17022 549 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 TRIM22Q8IYM9 498 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 ZNF654Q8IZM8 581 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 RIOK1Q9BRS2 568 aaKnown RBP21.53■■□□□ 1.04
SNX4-201ENST00000251775 UBE4AQ14139 1066 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 TMTC2Q8N394 836 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 IQUBQ8NA54 791 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 NUP133Q8WUM0 1156 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 ZSWIM4Q9H7M6 989 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 BSDC1Q9NW68 430 aaPredicted RBP21.53■■□□□ 1.04
SNX4-201ENST00000251775 KCNH3Q9ULD8 1083 aa21.53■■□□□ 1.04
SNX4-201ENST00000251775 MDM2Q00987 491 aaPredicted RBP21.52■■□□□ 1.04
SNX4-201ENST00000251775 FMR1Q06787 632 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNX4-201ENST00000251775 MTF1Q14872 753 aa21.52■■□□□ 1.04
SNX4-201ENST00000251775 SEC23AQ15436 765 aa21.52■■□□□ 1.04
SNX4-201ENST00000251775 FANCBQ8NB91 859 aa21.52■■□□□ 1.04
SNX4-201ENST00000251775 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
SNX4-201ENST00000251775 ANAPC4Q9UJX5 808 aa21.52■■□□□ 1.04
SNX4-201ENST00000251775 MINPP1Q9UNW1 487 aa21.52■■□□□ 1.04
SNX4-201ENST00000251775 ACTN2P35609 894 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 DYNLL1P63167 89 aaKnown RBP21.52■■□□□ 1.03
SNX4-201ENST00000251775 BICDL1Q6ZP65 573 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 SRGAP1Q7Z6B7 1085 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 C10orf67Q8IYJ2 551 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 UBAC1Q9BSL1 405 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.03
SNX4-201ENST00000251775 SCN7AQ01118 1682 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 DEXIO95424 95 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 CHMP4BP1P59074 171 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 BEND6Q5SZJ8 279 aaPredicted RBP21.51■■□□□ 1.03
SNX4-201ENST00000251775 ZNF384Q8TF68 577 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 HNRNPLLQ8WVV9 542 aaKnown RBP21.51■■□□□ 1.03
SNX4-201ENST00000251775 CELF1Q92879 486 aaKnown RBP21.51■■□□□ 1.03
SNX4-201ENST00000251775 NFE2L3Q9Y4A8 694 aa21.51■■□□□ 1.03
SNX4-201ENST00000251775 SAFBQ15424 915 aaKnown RBP eCLIP21.51■■□□□ 1.03
SNX4-201ENST00000251775 SRLQ86TD4 932 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms