RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 GNAT2P19087 354 aa11.57□□□□□ -0.56
COPB1-201ENST00000249923 ADKP55263 362 aaKnown RBP11.57□□□□□ -0.56
COPB1-201ENST00000249923 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
COPB1-201ENST00000249923 MTF1Q14872 753 aa11.57□□□□□ -0.56
COPB1-201ENST00000249923 SMYD4Q8IYR2 804 aaPredicted RBP11.57□□□□□ -0.56
COPB1-201ENST00000249923 CELF1Q92879 486 aaKnown RBP11.57□□□□□ -0.56
COPB1-201ENST00000249923 WDR24Q96S15 920 aa11.57□□□□□ -0.56
COPB1-201ENST00000249923 FEZ1Q99689 392 aa11.57□□□□□ -0.56
COPB1-201ENST00000249923 PARP3Q9Y6F1 533 aa11.57□□□□□ -0.56
COPB1-201ENST00000249923 MORC2Q9Y6X9 1032 aaPredicted RBP11.57□□□□□ -0.56
COPB1-201ENST00000249923 COBLO75128 1261 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 URI1O94763 535 aaPredicted RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 FGRP09769 529 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 ETF1P62495 437 aaKnown RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 IL17AQ16552 155 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 SH3RF1Q7Z6J0 888 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 MTRQ99707 1265 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 OGFRQ9NZT2 677 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 TEX33O43247 280 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 IGHMBP2P38935 993 aaKnown RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
COPB1-201ENST00000249923 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 DNAI1Q9UI46 699 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 CUL4BQ13620 913 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 AMIGO3Q86WK7 504 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 TRIM22Q8IYM9 498 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 CCDC34Q96HJ3 373 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 EPC1Q9H2F5 836 aa11.56□□□□□ -0.56
COPB1-201ENST00000249923 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 ZNF397Q8NF99 534 aaPredicted RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.566e-9■■■■■ 35.4
COPB1-201ENST00000249923 AHDC1Q5TGY3 1603 aaPredicted RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 CNTNAP5Q8WYK1 1306 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 CYP2D6P10635 497 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 RCAN1P53805 252 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 NR1I3Q14994 352 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 UTP14CQ5TAP6 766 aaKnown RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 ENOX1Q8TC92 643 aaKnown RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 WASF1Q92558 559 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 SYMPKQ92797 1274 aaKnown RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 MTA3Q9BTC8 594 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 RAI14Q9P0K7 980 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 V9GY48 417 aaPredicted RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 TPM4P67936 248 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 STAMQ92783 540 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 DHX58Q96C10 678 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 DESI2Q9BSY9 194 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 IRX2Q9BZI1 471 aaPredicted RBP11.55□□□□□ -0.56
COPB1-201ENST00000249923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.566e-6■■□□□ 13.9
COPB1-201ENST00000249923 PPP2R2CQ9Y2T4 447 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 PHLPP2Q6ZVD8 1323 aa11.55□□□□□ -0.56
COPB1-201ENST00000249923 PDE4CQ08493 712 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 TXNRD3Q86VQ6 643 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 KIFC2Q96AC6 838 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 MRPL44Q9H9J2 332 aaKnown RBP11.54□□□□□ -0.56
COPB1-201ENST00000249923 XDHP47989 1333 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 AFMP43652 599 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 SART3Q15020 963 aaKnown RBP11.54□□□□□ -0.56
COPB1-201ENST00000249923 DDB1Q16531 1140 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 NSUN4Q96CB9 384 aaKnown RBP11.54□□□□□ -0.56
COPB1-201ENST00000249923 PAGE5Q96GU1 130 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 AATFQ9NY61 560 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPB1-201ENST00000249923 A0A1B0GTH6 734 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 PBX1P40424 430 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 CLCN6P51797 869 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 SAFBQ15424 915 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPB1-201ENST00000249923 E2F4Q16254 413 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 ESR2Q92731 530 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 FHOD1Q9Y613 1164 aa11.54□□□□□ -0.56
COPB1-201ENST00000249923 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 USP17L21D6R901 530 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 PRPF3O43395 683 aaKnown RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 PRDX5P30044 214 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 PLCD1P51178 756 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 SPECC1LQ69YQ0 1117 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
COPB1-201ENST00000249923 RNF41Q9H4P4 317 aaPredicted RBP11.53□□□□□ -0.56
COPB1-201ENST00000249923 JAG2Q9Y219 1238 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms