RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
NOD1-201ENST00000222823 EVCP57679 992 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 GIMAP7Q8NHV1 300 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
NOD1-201ENST00000222823 PPARAQ07869 468 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
NOD1-201ENST00000222823 TTC14Q96N46 770 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 CAPN2P17655 700 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 ADCY7P51828 1080 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 BIRC3Q13489 604 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 ADALQ6DHV7 355 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
NOD1-201ENST00000222823 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ATP2C2O75185 946 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ERO1AQ96HE7 468 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 TSNARE1Q96NA8 513 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ADCY9O60503 1353 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 PFKFB2O60825 505 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 FGAP02671 866 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 REXO1Q8N1G1 1221 aaKnown RBP12.86□□□□□ -0.35
NOD1-201ENST00000222823 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 FNBP1Q96RU3 617 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
NOD1-201ENST00000222823 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 H0YIN7 160 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 LARGE1O95461 756 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 TCP10Q12799 353 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ZBTB9Q96C00 473 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 USP28Q96RU2 1077 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 PAIP2Q9BPZ3 127 aaKnown RBP12.86□□□□□ -0.35
NOD1-201ENST00000222823 TSGA10Q9BZW7 698 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 RSPH14Q9UHP6 348 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
NOD1-201ENST00000222823 ARHGEF35A5YM69 484 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 GYG1P46976 350 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 SMTNP53814 917 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 MSANTD4Q8NCY6 345 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 MTUS1Q9ULD2 1270 aa12.86□□□□□ -0.35
NOD1-201ENST00000222823 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 MFSD14BQ5SR56 506 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 CYP26C1Q6V0L0 522 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 ZNF589Q86UQ0 364 aaPredicted RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 IMPACTQ9P2X3 320 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 CPXCR1Q8N123 301 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 STMN4Q9H169 189 aaPredicted RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 ARPP21Q9UBL0 812 aaPredicted RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
NOD1-201ENST00000222823 TAB2Q9NYJ8 693 aa12.85□□□□□ -0.35
NOD1-201ENST00000222823 IVLP07476 585 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 HARSP12081 509 aaKnown RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 BCAMP50895 628 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 GTF2IP78347 998 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 CFAP58Q5T655 872 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 DNM3Q9UQ16 869 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 KIF4AO95239 1232 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 IGKV5-2P06315 115 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 GRM1Q13255 1194 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 CALCRLQ16602 461 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 MYRIPQ8NFW9 859 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 NSRP1Q9H0G5 558 aaKnown RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
NOD1-201ENST00000222823 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 PDE8BO95263 885 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 WDR44Q5JSH3 913 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 CABP7Q86V35 215 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
NOD1-201ENST00000222823 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 C17orf53Q8N3J3 647 aaPredicted RBP12.84□□□□□ -0.35
NOD1-201ENST00000222823 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms