RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Krtap5-3Q9D226 196 aa16.69■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Eef2P58252 858 aaKnown RBP16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Nfatc2ipO09130 412 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Pcdhb14Q6PB90 796 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Clic6Q8BHB9 596 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 VmacQ8BP01 174 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 WaslQ91YD9 501 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Iqca1Q9CUL5 857 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Tmem47Q9JJG6 181 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ltn1Q6A009 1767 aa16.68■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Zkscan7E9PVW1 718 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cep120Q7TSG1 988 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Golph3lQ8R088 285 aaKnown RBP16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Atxn7Q8R4I1 867 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Mad2l2Q9D752 211 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Gucy1a2F8VQK3 730 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Dync1i1O88485 628 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Pex1Q5BL07 1284 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 DaglaQ6WQJ1 1044 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Dpp8Q80YA7 892 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Fam114a1Q9D281 569 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Large1Q9Z1M7 756 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Plekhg2Q6KAU7 1340 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Oxsr1Q6P9R2 527 aa16.67■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ces1aE9PYP1 563 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Arhgef2Q60875 985 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Hic2Q9JLZ6 619 aaKnown RBP16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 AaasP58742 546 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ppp4cP97470 307 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Armc2Q3URY6 854 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Tm4sf1Q64302 202 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 IarsQ8BU30 1262 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Plekhg6Q8R0J1 787 aa16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Yeats4Q9CR11 227 aaKnown RBP16.66■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cyp3a25O09158 503 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Dapk3O54784 448 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 PcQ05920 1178 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Kif1bpQ6ZPU9 617 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Kctd3Q8BFX3 815 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Ubxn4Q8VCH8 506 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Sel1lQ9Z2G6 790 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Kcna1P16388 495 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cyp2c67Q569X9 491 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Cyp7b1Q60991 507 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Mei1Q9D4I2 1268 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Trmt112Q9DCG9 125 aa16.65■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Sap30bpQ02614 308 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Spata18Q0P557 537 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Mars2Q499X9 586 aaKnown RBP16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Myo19Q5SV80 963 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Pdzph1Q8BGR1 1238 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Xrcc4Q924T3 326 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 NenfQ9CQ45 171 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Tfap4Q9JIZ5 338 aa16.64■□□□□ 0.26
Rnf4-207ENSMUST00000182709 Tmem109Q3UBX0 243 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 LrmpQ60664 539 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 CtcfQ61164 736 aaKnown RBP16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Tmem132aQ922P8 1018 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Polr2dQ9D7M8 142 aaKnown RBP16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Arpp21Q9DCB4 807 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Gm43638A0A0J9YU36 694 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Klrk1O54709 232 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 RdxP26043 583 aaKnown RBP16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Oxr1Q4KMM3 866 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 CrkQ64010 304 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Prpf3Q922U1 683 aaKnown RBP16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Nrbp1Q99J45 535 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Trim11Q99PQ2 467 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Ubxn8Q9QZ49 277 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Stxbp4Q9WV89 557 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Ly75Q60767 1723 aa16.64■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Ktn1Q61595 1327 aaKnown RBP16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Card6E9PWH2 1175 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Rsph10bE9PYQ0 876 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Cdkn1cP49919 348 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Klhdc9Q3USL1 350 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Atp2b4Q6Q477 1205 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Rgs17Q9QZB0 210 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Klrc1Q9Z202 244 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Col4a5Q63ZW6 1691 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 AfdnQ9QZQ1 1820 aaKnown RBP16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Calm1P0DP26 149 aaKnown RBP16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Calm2P0DP27 149 aaKnown RBP16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Calm3P0DP28 149 aaKnown RBP16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 B4galnt4Q766D5 1034 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Csrnp2Q8BGQ2 534 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Kcnh3Q9WVJ0 1095 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Sned1Q70E20 1403 aa16.63■□□□□ 0.25
Rnf4-207ENSMUST00000182709 A0A0U1RNP2 1173 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Cspp1B2RX88 1205 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Ifi207E9Q3L4 978 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Nbr1P97432 988 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 SpidrQ8BGX7 933 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Trmt2aQ8BNV1 574 aaKnown RBP16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Tcp11l1Q8BTG3 509 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Rasgrp4Q8BTM9 673 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Luzp1Q8R4U7 1068 aaKnown RBP16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Hmx1O70218 332 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 Scg2Q03517 617 aa16.62■□□□□ 0.25
Rnf4-207ENSMUST00000182709 CtifQ6PEE2 600 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms