RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rhbdf1Q6PIX5 856 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 TiprlQ8BH58 271 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Fbxo9Q8BK06 437 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Pkn2Q8BWW9 983 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Card11Q8CIS0 1159 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tlr3Q99MB1 905 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Chmp3Q9CQ10 224 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Q9D1Z2 194 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Atp6v1e2Q9D593 226 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tarbp1E9Q368 1579 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Slc9a3G3X939 829 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 ArsbP50429 534 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ogfod1Q3U0K8 545 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ccdc61Q3UJV1 511 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Fbxo38Q8BMI0 1194 aa10.39□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm8257E9Q8R3 264 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ppargc1aO70343 797 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gdf7P43029 461 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Map3k7Q62073 579 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Acbd3Q8BMP6 525 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Frmd6Q8C0V9 622 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Smc1aQ9CU62 1233 aaKnown RBP10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 RpainQ9CWY9 219 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Iqgap1Q9JKF1 1657 aaKnown RBP10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Magea1O89006 320 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Lig1P37913 916 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Stat3P42227 770 aaKnown RBP10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Prpf4bQ61136 1007 aaKnown RBP10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Serpina3bQ8BYY9 420 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Trim47Q8C0E3 641 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Nt5dc1Q8C5P5 467 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Adcy4Q91WF3 1077 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 FancgQ9EQR6 623 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Jmjd6Q9ERI5 403 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Plscr1Q9JJ00 328 aa10.38□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm10073E9Q3T0 114 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 1700024B05RikE9Q6D7 167 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm10378F6XQQ1 160 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm7995L7N2E4 160 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Adra2bP30545 450 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Aimp1P31230 310 aaKnown RBP10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Nr5a1P33242 462 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Edem3Q2HXL6 931 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Fkbp5Q64378 456 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 DgkbQ6NS52 802 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ccdc189Q6NZQ0 333 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tmco3Q8BH01 678 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 SpastQ9QYY8 614 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Atp7aQ64430 1491 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Iqgap3F8VQ29 1632 aa10.37□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ccdc163A2AGD7 326 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm597E9Q8J5 896 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Hexim2Q3TVI4 313 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 CcncQ62447 283 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Pxylp1Q8BHA9 480 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Bmt2Q8BXK4 403 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Ssh3Q8K330 649 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gys2Q8VCB3 704 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Sil1Q9EPK6 465 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Prkab1Q9R078 270 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Sall3Q62255 1320 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Edc4Q3UJB9 1406 aaKnown RBP10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tubgcp6G5E8P0 1769 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 A0A1L1SQF0 893 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Mphosph9A6H5Y1 991 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm382B1AXN3 1250 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 D830030K20RikE9PYQ5 218 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm16440K7N6G6 218 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm2244L7N2A3 218 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm3278L7N2D2 218 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm8271L7N2E2 218 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm3532M0QWL4 194 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Atp6v0a2P15920 856 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Hoxd12P23812 268 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 NrlP54846 237 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Mkl2P59759 1080 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Dennd1bQ3U1T9 766 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Rsrp1Q3UC65 298 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Cfap36Q8C6E0 343 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 MicalclQ9D5U9 680 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Clec4aQ9QZ15 238 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Kat6bQ8BRB7 1872 aa10.36□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Herc3A6H6S0 1050 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tlx1P43345 332 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Pld6Q5SWZ9 221 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Nr1h4Q60641 488 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Klra7Q60654 280 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Zbtb8bQ8CII0 484 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Slc13a3Q91Y63 600 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Tcf7l2Q924A0 459 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Stk31Q99MW1 1018 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 AasdhpptQ9CQF6 309 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 PdcQ9QW08 244 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 HnrnpcQ9Z204 313 aaKnown RBP10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Prrc2bQ7TPM1 1486 aaKnown RBP10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm3252E9PUT9 216 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Rasal2E9PW37 1286 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm3002E9PW72 216 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm973E9Q295 1059 aa10.35□□□□□ -0.75
Upf3b-201ENSMUST00000076265 Gm3468E9QAJ8 216 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms