RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Znf667Q2TL60 609 aa19.29■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Mad2l2Q9D752 211 aa19.29■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Dock5B2RY04 1868 aa19.29■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Chd5A2A8L1 1946 aa19.29■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Gm973E9Q295 1059 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Gm5624F6ZZG8 207 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Tbc1d23Q8K0F1 684 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Chrna2Q91X60 512 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Il7P10168 154 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Kif22Q3V300 660 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Prpf38aQ4FK66 312 aaKnown RBP19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Ppp2r5bQ6PD28 497 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Frmd3Q8BHD4 595 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Col20a1Q923P0 1320 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Atp6v0a2P15920 856 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Terf1P70371 421 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Ap5z1Q3U829 807 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Myo19Q5SV80 963 aa19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 HibadhQ99L13 335 aaKnown RBP19.28■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 A0A0U1RNP2 1173 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 MarcksP26645 309 aaKnown RBP19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Sdc2P43407 202 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Chrna5Q2MKA5 467 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 VrtnQ3SYK4 740 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Madcam1Q61826 405 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Myo1hQ9D6A1 958 aa19.27■□□□□ 0.68
Sec61a1-201ENSMUST00000032168 Sun3Q5SS91 320 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 LrmpQ60664 539 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cep131Q62036 1060 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Pim2Q62070 370 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tacc1Q6Y685 774 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Kctd3Q8BFX3 815 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Krtap5-3Q9D226 196 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Gtf2iQ9ESZ8 998 aaKnown RBP19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Ubxn8Q9QZ49 277 aa19.27■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 SsbP32067 415 aaKnown RBP19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Krt39Q6IFX4 482 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Ints4Q8CIM8 964 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Ccdc94Q9D6J3 314 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Snapc4Q8BP86 1333 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Pfkfb3A7UAK5 555 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Acad12D3Z7X0 555 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tmtc2Q56A06 836 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 TfrcQ62351 763 aaKnown RBP19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tas2r124Q7M718 309 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Ankrd1Q9CR42 319 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Plekhg2Q6KAU7 1340 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cyp2j7A0A140T8U1 504 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Epb41l2O70318 988 aaKnown RBP19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 DnttP09838 530 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Kcna1P16388 495 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Kiaa0319Q5SZV5 1081 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tmem60Q8K174 133 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Trmt44Q9D2Q2 713 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Baiap2l1Q9DBJ3 514 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tmem47Q9JJG6 181 aa19.26■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Grem2O88273 168 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Glg1Q61543 1175 aaKnown RBP19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Rps6ka5Q8C050 863 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Dctpp1Q9QY93 170 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Gas1Q01721 343 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tab2Q99K90 693 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Homer1Q9Z2Y3 366 aa19.25■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Trim30aP15533 496 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cdkn1cP49919 348 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Rad23bP54728 416 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Usp5P56399 858 aaKnown RBP19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 ParnQ8VDG3 624 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Grpel1Q99LP6 217 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Eif6O55135 245 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Alppl2P24823 529 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cdh15P33146 784 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Frat1P70339 274 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Scg2Q03517 617 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Slc7a1Q09143 622 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Armc2Q3URY6 854 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Fxr1Q61584 677 aaKnown RBP19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Znf568E9PYI1 671 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Gm21969J3QJZ1 289 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Pla2g4bP0C871 782 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Gja5Q01231 358 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cdk8Q8R3L8 464 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Cd2apQ9JLQ0 637 aa19.24■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 MeiocA2AG06 965 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 A430078G23RikE9Q7Y4 484 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Txnrd3Q99MD6 652 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Myh8P13542 1937 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Ppp4cP97470 307 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Eya3P97480 510 aa19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Hexim1Q8R409 356 aaKnown RBP19.23■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Bend4P86174 541 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Kiaa1468Q148V7 1216 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Fam198bQ3UPI1 517 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Pde5aQ8CG03 865 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Plekha7Q3UIL6 1118 aaKnown RBP19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Caps2Q8BUG5 550 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Tsc2Q61037 1814 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Anks1aP59672 1150 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 Slc9a1Q61165 820 aa19.22■□□□□ 0.67
Sec61a1-201ENSMUST00000032168 KhnynQ80U38 671 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms