RNA–Protein interactions for RNA: ENSMUST00000224820.1

Zkscan3-208, Transcript of Zinc finger protein with KRAB and SCAN domains 3, mousemouse

BASIC

Gene Zkscan3, Length 5,398 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Zkscan3-208ENSMUST00000224820 Sprr2hO70559 108 aa4.76□□□□□ -1.65
Zkscan3-208ENSMUST00000224820 Krtap17-1A2A5X6 109 aa4.74□□□□□ -1.65
Zkscan3-208ENSMUST00000224820 Gm11938Q9D3H4 131 aa4.74□□□□□ -1.65
Zkscan3-208ENSMUST00000224820 Gm11562A0PK51 136 aa4.69□□□□□ -1.66
Zkscan3-208ENSMUST00000224820 Gm11563B1AQ90 168 aa4.69□□□□□ -1.66
Zkscan3-208ENSMUST00000224820 Krtap4-7Q9D732 168 aa4.69□□□□□ -1.66
Zkscan3-208ENSMUST00000224820 Krtap31-1Q9D644 177 aa4.66□□□□□ -1.66
Zkscan3-208ENSMUST00000224820 Muc5bE9Q5I3 4800 aa4.62□□□□□ -1.67
Zkscan3-208ENSMUST00000224820 Rnf213E9Q555 5152 aaKnown RBP4.61□□□□□ -1.67
Zkscan3-208ENSMUST00000224820 Ush2AQ2QI47 5193 aa4.56□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Gm11596B1AQB0 205 aa4.56□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Syne1Q6ZWR6 8799 aa4.55□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Gm11564A2A4L9 201 aa4.55□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Gm11595B1AQA7 289 aa4.55□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Krtap4-8B1AQA8 209 aa4.55□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 2300003K06RikA2A4M0 262 aa4.55□□□□□ -1.68
Zkscan3-208ENSMUST00000224820 Krtap4-9B1AQA9 244 aa4.51□□□□□ -1.69
Zkscan3-208ENSMUST00000224820 Lce1kJ3QP15 125 aa4.46□□□□□ -1.7
Zkscan3-208ENSMUST00000224820 Mt3P28184 68 aa4.38□□□□□ -1.71
Zkscan3-208ENSMUST00000224820 Krtap4-13Q9D7P3 165 aa4.38□□□□□ -1.71
Zkscan3-208ENSMUST00000224820 SspoQ8CG65 4998 aa4.35□□□□□ -1.71
Zkscan3-208ENSMUST00000224820 Gm11555B1AQ89 175 aa4.34□□□□□ -1.71
Zkscan3-208ENSMUST00000224820 A0A1Y7VLE6 161 aa4.27□□□□□ -1.73
Zkscan3-208ENSMUST00000224820 Krtap4-16Q91W93 202 aa4.23□□□□□ -1.73
Zkscan3-208ENSMUST00000224820 Fsip2A2ARZ3 6995 aa4.21□□□□□ -1.73
Zkscan3-208ENSMUST00000224820 Mt1P02802 61 aaKnown RBP4.18□□□□□ -1.74
Zkscan3-208ENSMUST00000224820 Syne2Q6ZWQ0 6874 aaKnown RBP4.18□□□□□ -1.74
Zkscan3-208ENSMUST00000224820 Lce1a1Q9CQH5 143 aa4.16□□□□□ -1.74
Zkscan3-208ENSMUST00000224820 Krtap6-3A0A087WQL6 57 aa4.07□□□□□ -1.76
Zkscan3-208ENSMUST00000224820 A0A1Y7VJH8 109 aa3.98□□□□□ -1.77
Zkscan3-208ENSMUST00000224820 A030003K21RikA0A1Y7VIM3 128 aa3.96□□□□□ -1.78
Zkscan3-208ENSMUST00000224820 Krtap20-2E9Q0A8 60 aa3.89□□□□□ -1.79
Zkscan3-208ENSMUST00000224820 Gm11554B1AQB2 190 aa3.88□□□□□ -1.79
Zkscan3-208ENSMUST00000224820 ObscnA2AAJ9 8891 aaKnown RBP3.86□□□□□ -1.79
Zkscan3-208ENSMUST00000224820 Sprr2bO70554 98 aa3.8□□□□□ -1.8
Zkscan3-208ENSMUST00000224820 Krtap28-10A0A1Y7VP58 119 aa3.79□□□□□ -1.8
Zkscan3-208ENSMUST00000224820 Muc16A0A140LJ72 8478 aa3.72□□□□□ -1.81
Zkscan3-208ENSMUST00000224820 Gm6217A0A1Y7VJK9 128 aa3.7□□□□□ -1.82
Zkscan3-208ENSMUST00000224820 Krtap28-13A0A087WQP5 138 aa3.68□□□□□ -1.82
Zkscan3-208ENSMUST00000224820 A030005K14RikA0A1Y7VNY1 122 aa3.66□□□□□ -1.82
Zkscan3-208ENSMUST00000224820 A0A1Y7VJ07 166 aa3.56□□□□□ -1.84
Zkscan3-208ENSMUST00000224820 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Zkscan3-208ENSMUST00000224820 Macf1Q9QXZ0 7354 aaKnown RBP3.46□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 A030014E15RikA0A1Y7VJV2 120 aa3.45□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 Gm7544A0A1Y7VJ58 118 aa3.44□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 Kmt2dQ6PDK2 5588 aa3.44□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 Eppk1Q8R0W0 6548 aa3.43□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 1110025L11RikO09048 78 aa3.4□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 Krtap6-5Q925H3 78 aa3.4□□□□□ -1.86
Zkscan3-208ENSMUST00000224820 DstQ91ZU6 7393 aaKnown RBP3.37□□□□□ -1.87
Zkscan3-208ENSMUST00000224820 Krtap31-2Q8CAY5 177 aa3.29□□□□□ -1.88
Zkscan3-208ENSMUST00000224820 Gm11568A2A4M2 211 aa3.24□□□□□ -1.89
Zkscan3-208ENSMUST00000224820 Krtap9-1Q64526 186 aa3.24□□□□□ -1.89
Zkscan3-208ENSMUST00000224820 Gm10229O08631 77 aa3.19□□□□□ -1.9
Zkscan3-208ENSMUST00000224820 Gm11559Q9D3H7 191 aa3.18□□□□□ -1.9
Zkscan3-208ENSMUST00000224820 NebE9Q1W3 7152 aa3.17□□□□□ -1.9
Zkscan3-208ENSMUST00000224820 A0A286YCP9 139 aa3.01□□□□□ -1.93
Zkscan3-208ENSMUST00000224820 Muc19Q6PZE0 7524 aa3.01□□□□□ -1.93
Zkscan3-208ENSMUST00000224820 Phgr1Q8K0G7 91 aa2.96□□□□□ -1.94
Zkscan3-208ENSMUST00000224820 Krtap5-2Q9D5Z7 189 aa2.95□□□□□ -1.94
Zkscan3-208ENSMUST00000224820 Gm11639A0A1D5RLM8 5808 aa2.91□□□□□ -1.94
Zkscan3-208ENSMUST00000224820 Gpr98Q8VHN7 6298 aaKnown RBP2.77□□□□□ -1.97
Zkscan3-208ENSMUST00000224820 Gm4553A0A1B0GSA9 284 aa2.75□□□□□ -1.97
Zkscan3-208ENSMUST00000224820 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Zkscan3-208ENSMUST00000224820 Gm10153A0A1B0GRL1 320 aa2.58□□□□□ -2
Zkscan3-208ENSMUST00000224820 Gm2431E9Q8S1 172 aa2.57□□□□□ -2
Zkscan3-208ENSMUST00000224820 Krtap6-2O08884 159 aa2.56□□□□□ -2
Zkscan3-208ENSMUST00000224820 AhnakE9Q616 5656 aaKnown RBP2.47□□□□□ -2.01
Zkscan3-208ENSMUST00000224820 Krtap21-1Q925H4 128 aa2.46□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Gm45337A0A1B0GS71 263 aa2.45□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Gm40460A0A1B0GR10 244 aa2.43□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Gm7579A0A1B0GRJ4 243 aa2.43□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Krtap5-5Q2TA51 241 aa2.43□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Krtap5-4Q62220 223 aa2.43□□□□□ -2.02
Zkscan3-208ENSMUST00000224820 Gm39115A0A1B0GSH7 232 aa2.21□□□□□ -2.06
Zkscan3-208ENSMUST00000224820 Gm11567Q9D141 195 aa2.06□□□□□ -2.08
Zkscan3-208ENSMUST00000224820 Gm45618A0A1B0GSA0 219 aa2.03□□□□□ -2.09
Zkscan3-208ENSMUST00000224820 Gm29735A0A1B0GT06 219 aa1.85□□□□□ -2.11
Zkscan3-208ENSMUST00000224820 Gm4559A4IF42 199 aa1.61□□□□□ -2.15
Zkscan3-208ENSMUST00000224820 Krtap5-1Q64507 230 aa1.58□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 75.3 ms