RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Lce1lQ9D1G7 135 aa7.13□□□□□ -1.27
Trim27-207ENSMUST00000223065 Gm11938Q9D3H4 131 aa7.1□□□□□ -1.27
Trim27-207ENSMUST00000223065 Krtap4-7Q9D732 168 aa7.1□□□□□ -1.27
Trim27-207ENSMUST00000223065 Lce1eQ9D139 143 aa7.08□□□□□ -1.28
Trim27-207ENSMUST00000223065 4933428G20RikQ9D3X4 101 aa6.99□□□□□ -1.29
Trim27-207ENSMUST00000223065 Lce1cQ9D1C5 147 aa6.84□□□□□ -1.31
Trim27-207ENSMUST00000223065 Syne1Q6ZWR6 8799 aa6.79□□□□□ -1.32
Trim27-207ENSMUST00000223065 Krtap19-4Q925H7 84 aa6.78□□□□□ -1.32
Trim27-207ENSMUST00000223065 Lce1a1Q9CQH5 143 aa6.75□□□□□ -1.33
Trim27-207ENSMUST00000223065 Lce3bQ9CQM7 98 aa6.75□□□□□ -1.33
Trim27-207ENSMUST00000223065 Krtap20-2E9Q0A8 60 aa6.64□□□□□ -1.35
Trim27-207ENSMUST00000223065 A0A1Y7VJH8 109 aa6.6□□□□□ -1.35
Trim27-207ENSMUST00000223065 Gm10100J3QK64 120 aa6.57□□□□□ -1.36
Trim27-207ENSMUST00000223065 Lce1fB9EJP6 147 aa6.56□□□□□ -1.36
Trim27-207ENSMUST00000223065 Lce3cQ91V05 98 aa6.43□□□□□ -1.38
Trim27-207ENSMUST00000223065 Gm10142J3KMP7 120 aa6.42□□□□□ -1.38
Trim27-207ENSMUST00000223065 Lce1kJ3QP15 125 aa6.42□□□□□ -1.38
Trim27-207ENSMUST00000223065 Krtap5-2Q9D5Z7 189 aa6.4□□□□□ -1.39
Trim27-207ENSMUST00000223065 Lce3eF8VQJ0 98 aa6.37□□□□□ -1.39
Trim27-207ENSMUST00000223065 Sprr2iO70560 76 aa6.37□□□□□ -1.39
Trim27-207ENSMUST00000223065 Lce3fQ6PAI4 98 aa6.37□□□□□ -1.39
Trim27-207ENSMUST00000223065 Lce3dE9Q8V1 98 aa6.32□□□□□ -1.4
Trim27-207ENSMUST00000223065 Macf1Q9QXZ0 7354 aaKnown RBP6.25□□□□□ -1.41
Trim27-207ENSMUST00000223065 Sprr2hO70559 108 aa6.23□□□□□ -1.41
Trim27-207ENSMUST00000223065 Gm11559Q9D3H7 191 aa6.23□□□□□ -1.41
Trim27-207ENSMUST00000223065 Gm11568A2A4M2 211 aa6.22□□□□□ -1.41
Trim27-207ENSMUST00000223065 Krtap9-1Q64526 186 aa6.22□□□□□ -1.41
Trim27-207ENSMUST00000223065 ObscnA2AAJ9 8891 aaKnown RBP6.22□□□□□ -1.41
Trim27-207ENSMUST00000223065 Mt1P02802 61 aaKnown RBP6.2□□□□□ -1.42
Trim27-207ENSMUST00000223065 Gm11554B1AQB2 190 aa6.14□□□□□ -1.43
Trim27-207ENSMUST00000223065 Eppk1Q8R0W0 6548 aa6.11□□□□□ -1.43
Trim27-207ENSMUST00000223065 Lce3aQ497I5 98 aa6.1□□□□□ -1.43
Trim27-207ENSMUST00000223065 Gm4553A0A1B0GSA9 284 aa6.07□□□□□ -1.44
Trim27-207ENSMUST00000223065 A030005L19RikA0A1Y7VIU2 113 aa6.03□□□□□ -1.44
Trim27-207ENSMUST00000223065 Sprr2eO70556 76 aa5.98□□□□□ -1.45
Trim27-207ENSMUST00000223065 Kmt2dQ6PDK2 5588 aa5.97□□□□□ -1.45
Trim27-207ENSMUST00000223065 Gm2431E9Q8S1 172 aa5.92□□□□□ -1.46
Trim27-207ENSMUST00000223065 Sprr2fO70557 76 aa5.87□□□□□ -1.47
Trim27-207ENSMUST00000223065 Krtap31-1Q9D644 177 aa5.85□□□□□ -1.47
Trim27-207ENSMUST00000223065 Gm45337A0A1B0GS71 263 aa5.84□□□□□ -1.47
Trim27-207ENSMUST00000223065 Gm11639A0A1D5RLM8 5808 aa5.79□□□□□ -1.48
Trim27-207ENSMUST00000223065 Gm10153A0A1B0GRL1 320 aa5.78□□□□□ -1.48
Trim27-207ENSMUST00000223065 Muc19Q6PZE0 7524 aa5.78□□□□□ -1.48
Trim27-207ENSMUST00000223065 Hmcn1D3YXG0 5634 aa5.77□□□□□ -1.49
Trim27-207ENSMUST00000223065 Gm40460A0A1B0GR10 244 aa5.62□□□□□ -1.51
Trim27-207ENSMUST00000223065 Gm7579A0A1B0GRJ4 243 aa5.62□□□□□ -1.51
Trim27-207ENSMUST00000223065 Krtap5-5Q2TA51 241 aa5.62□□□□□ -1.51
Trim27-207ENSMUST00000223065 Krtap5-4Q62220 223 aa5.62□□□□□ -1.51
Trim27-207ENSMUST00000223065 Mt3P28184 68 aa5.52□□□□□ -1.53
Trim27-207ENSMUST00000223065 DstQ91ZU6 7393 aaKnown RBP5.51□□□□□ -1.53
Trim27-207ENSMUST00000223065 Gm39115A0A1B0GSH7 232 aa5.5□□□□□ -1.53
Trim27-207ENSMUST00000223065 A0A1Y7VLE6 161 aa5.48□□□□□ -1.53
Trim27-207ENSMUST00000223065 Gpr98Q8VHN7 6298 aaKnown RBP5.41□□□□□ -1.54
Trim27-207ENSMUST00000223065 Gm10024A0A0A0MQA4 119 aa5.31□□□□□ -1.56
Trim27-207ENSMUST00000223065 NebE9Q1W3 7152 aa5.28□□□□□ -1.56
Trim27-207ENSMUST00000223065 Krtap4-16Q91W93 202 aa5.26□□□□□ -1.57
Trim27-207ENSMUST00000223065 Krtap31-2Q8CAY5 177 aa5.2□□□□□ -1.58
Trim27-207ENSMUST00000223065 Gm45618A0A1B0GSA0 219 aa5.07□□□□□ -1.6
Trim27-207ENSMUST00000223065 AhnakE9Q616 5656 aaKnown RBP5.06□□□□□ -1.6
Trim27-207ENSMUST00000223065 Muc16A0A140LJ72 8478 aa4.82□□□□□ -1.64
Trim27-207ENSMUST00000223065 1110025L11RikO09048 78 aa4.72□□□□□ -1.65
Trim27-207ENSMUST00000223065 Krtap6-5Q925H3 78 aa4.72□□□□□ -1.65
Trim27-207ENSMUST00000223065 A0A1Y7VJ07 166 aa4.38□□□□□ -1.71
Trim27-207ENSMUST00000223065 Sprr2bO70554 98 aa4.25□□□□□ -1.73
Trim27-207ENSMUST00000223065 Krtap28-10A0A1Y7VP58 119 aa4.2□□□□□ -1.74
Trim27-207ENSMUST00000223065 Gm10229O08631 77 aa4.18□□□□□ -1.74
Trim27-207ENSMUST00000223065 Gm29735A0A1B0GT06 219 aa4.14□□□□□ -1.75
Trim27-207ENSMUST00000223065 Krtap28-13A0A087WQP5 138 aa4.04□□□□□ -1.76
Trim27-207ENSMUST00000223065 Gm11567Q9D141 195 aa4.02□□□□□ -1.77
Trim27-207ENSMUST00000223065 A030005K14RikA0A1Y7VNY1 122 aa3.9□□□□□ -1.79
Trim27-207ENSMUST00000223065 Krtap21-1Q925H4 128 aa3.88□□□□□ -1.79
Trim27-207ENSMUST00000223065 A0A286YCP9 139 aa3.72□□□□□ -1.81
Trim27-207ENSMUST00000223065 Phgr1Q8K0G7 91 aa3.68□□□□□ -1.82
Trim27-207ENSMUST00000223065 Gm7544A0A1Y7VJ58 118 aa3.66□□□□□ -1.82
Trim27-207ENSMUST00000223065 Krtap6-2O08884 159 aa3.54□□□□□ -1.84
Trim27-207ENSMUST00000223065 A030014E15RikA0A1Y7VJV2 120 aa3.42□□□□□ -1.86
Trim27-207ENSMUST00000223065 A030003K21RikA0A1Y7VIM3 128 aa3.32□□□□□ -1.88
Trim27-207ENSMUST00000223065 Krtap5-1Q64507 230 aa3.14□□□□□ -1.91
Trim27-207ENSMUST00000223065 Gm6217A0A1Y7VJK9 128 aa3.03□□□□□ -1.92
Trim27-207ENSMUST00000223065 Gm4559A4IF42 199 aa2.41□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 53.5 ms