RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Syne1Q6ZWR6 8799 aa3.84□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Krtap9-5A2A5X3 358 aa3.83□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Lce1iQ9D6P5 149 aa3.81□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Lce1a2Q9D1K4 149 aa3.81□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Sprr2eO70556 76 aa3.8□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Mt4P47945 62 aa3.8□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Sprr2kO70562 68 aa3.79□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Krtap19-2Q925I0 141 aa3.78□□□□□ -1.8
Srp54b-202ENSMUST00000218879 Krtap4-13Q9D7P3 165 aa3.77□□□□□ -1.81
Srp54b-202ENSMUST00000218879 Krtap6-3A0A087WQL6 57 aa3.77□□□□□ -1.81
Srp54b-202ENSMUST00000218879 Muc16A0A140LJ72 8478 aa3.76□□□□□ -1.81
Srp54b-202ENSMUST00000218879 A0A1Y7VJ07 166 aa3.68□□□□□ -1.82
Srp54b-202ENSMUST00000218879 Gm6358A0A087WPH4 74 aa3.66□□□□□ -1.82
Srp54b-202ENSMUST00000218879 A030003K21RikA0A1Y7VIM3 128 aa3.66□□□□□ -1.82
Srp54b-202ENSMUST00000218879 Lce1lQ9D1G7 135 aa3.65□□□□□ -1.82
Srp54b-202ENSMUST00000218879 Mt2P02798 61 aa3.59□□□□□ -1.83
Srp54b-202ENSMUST00000218879 2300003K06RikA2A4M0 262 aa3.59□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Gm6217A0A1Y7VJK9 128 aa3.58□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Krtap19-4Q925H7 84 aa3.58□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Lce1bQ9D149 137 aa3.56□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Sprr2hO70559 108 aa3.56□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Gm10142J3KMP7 120 aa3.55□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Gm10100J3QK64 120 aa3.53□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Lce1cQ9D1C5 147 aa3.53□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Krtap4-7Q9D732 168 aa3.53□□□□□ -1.84
Srp54b-202ENSMUST00000218879 Gm38119A0A0A6YX29 146 aa3.52□□□□□ -1.85
Srp54b-202ENSMUST00000218879 Lce1a1Q9CQH5 143 aa3.49□□□□□ -1.85
Srp54b-202ENSMUST00000218879 A030014E15RikA0A1Y7VJV2 120 aa3.48□□□□□ -1.85
Srp54b-202ENSMUST00000218879 Lce1fB9EJP6 147 aa3.44□□□□□ -1.86
Srp54b-202ENSMUST00000218879 Krtap22-2J3QNX6 67 aa3.44□□□□□ -1.86
Srp54b-202ENSMUST00000218879 Krtap20-2E9Q0A8 60 aa3.43□□□□□ -1.86
Srp54b-202ENSMUST00000218879 A0A286YCP9 139 aa3.42□□□□□ -1.86
Srp54b-202ENSMUST00000218879 Lce3dE9Q8V1 98 aa3.36□□□□□ -1.87
Srp54b-202ENSMUST00000218879 Lce3eF8VQJ0 98 aa3.36□□□□□ -1.87
Srp54b-202ENSMUST00000218879 Lce3fQ6PAI4 98 aa3.36□□□□□ -1.87
Srp54b-202ENSMUST00000218879 Lce3bQ9CQM7 98 aa3.34□□□□□ -1.87
Srp54b-202ENSMUST00000218879 ObscnA2AAJ9 8891 aaKnown RBP3.34□□□□□ -1.87
Srp54b-202ENSMUST00000218879 Eppk1Q8R0W0 6548 aa3.33□□□□□ -1.88
Srp54b-202ENSMUST00000218879 Lce3cQ91V05 98 aa3.32□□□□□ -1.88
Srp54b-202ENSMUST00000218879 Gm10024A0A0A0MQA4 119 aa3.31□□□□□ -1.88
Srp54b-202ENSMUST00000218879 Lce3aQ497I5 98 aa3.29□□□□□ -1.88
Srp54b-202ENSMUST00000218879 Krtap4-16Q91W93 202 aa3.29□□□□□ -1.88
Srp54b-202ENSMUST00000218879 Krtap5-2Q9D5Z7 189 aa3.23□□□□□ -1.89
Srp54b-202ENSMUST00000218879 Gm11639A0A1D5RLM8 5808 aa3.21□□□□□ -1.9
Srp54b-202ENSMUST00000218879 Macf1Q9QXZ0 7354 aaKnown RBP3.19□□□□□ -1.9
Srp54b-202ENSMUST00000218879 Gm11554B1AQB2 190 aa3.13□□□□□ -1.91
Srp54b-202ENSMUST00000218879 Gm4553A0A1B0GSA9 284 aa3.1□□□□□ -1.91
Srp54b-202ENSMUST00000218879 Gm11559Q9D3H7 191 aa3.1□□□□□ -1.91
Srp54b-202ENSMUST00000218879 Gpr98Q8VHN7 6298 aaKnown RBP3.1□□□□□ -1.91
Srp54b-202ENSMUST00000218879 Gm11568A2A4M2 211 aa3.06□□□□□ -1.92
Srp54b-202ENSMUST00000218879 Muc19Q6PZE0 7524 aa3.05□□□□□ -1.92
Srp54b-202ENSMUST00000218879 Gm45337A0A1B0GS71 263 aa3.03□□□□□ -1.92
Srp54b-202ENSMUST00000218879 Kmt2dQ6PDK2 5588 aa3.02□□□□□ -1.93
Srp54b-202ENSMUST00000218879 Lce1kJ3QP15 125 aa2.97□□□□□ -1.93
Srp54b-202ENSMUST00000218879 Gm40460A0A1B0GR10 244 aa2.95□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Gm7579A0A1B0GRJ4 243 aa2.95□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Krtap5-5Q2TA51 241 aa2.95□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Krtap5-4Q62220 223 aa2.95□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Gm2431E9Q8S1 172 aa2.93□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Gm39115A0A1B0GSH7 232 aa2.92□□□□□ -1.94
Srp54b-202ENSMUST00000218879 Krtap9-1Q64526 186 aa2.88□□□□□ -1.95
Srp54b-202ENSMUST00000218879 Gm10153A0A1B0GRL1 320 aa2.86□□□□□ -1.95
Srp54b-202ENSMUST00000218879 NebE9Q1W3 7152 aa2.81□□□□□ -1.96
Srp54b-202ENSMUST00000218879 DstQ91ZU6 7393 aaKnown RBP2.8□□□□□ -1.96
Srp54b-202ENSMUST00000218879 Gm45618A0A1B0GSA0 219 aa2.79□□□□□ -1.96
Srp54b-202ENSMUST00000218879 Hmcn1D3YXG0 5634 aa2.78□□□□□ -1.96
Srp54b-202ENSMUST00000218879 Mt1P02802 61 aaKnown RBP2.68□□□□□ -1.98
Srp54b-202ENSMUST00000218879 AhnakE9Q616 5656 aaKnown RBP2.54□□□□□ -2
Srp54b-202ENSMUST00000218879 Sprr2bO70554 98 aa2.4□□□□□ -2.03
Srp54b-202ENSMUST00000218879 Mt3P28184 68 aa2.36□□□□□ -2.03
Srp54b-202ENSMUST00000218879 Gm29735A0A1B0GT06 219 aa2.19□□□□□ -2.06
Srp54b-202ENSMUST00000218879 1110025L11RikO09048 78 aa2.06□□□□□ -2.08
Srp54b-202ENSMUST00000218879 Krtap6-5Q925H3 78 aa2.06□□□□□ -2.08
Srp54b-202ENSMUST00000218879 Phgr1Q8K0G7 91 aa2.06□□□□□ -2.08
Srp54b-202ENSMUST00000218879 Gm11567Q9D141 195 aa1.98□□□□□ -2.09
Srp54b-202ENSMUST00000218879 Gm10229O08631 77 aa1.78□□□□□ -2.12
Srp54b-202ENSMUST00000218879 Krtap21-1Q925H4 128 aa1.76□□□□□ -2.13
Srp54b-202ENSMUST00000218879 Krtap5-1Q64507 230 aa1.73□□□□□ -2.13
Srp54b-202ENSMUST00000218879 Gm4559A4IF42 199 aa1.64□□□□□ -2.15
Srp54b-202ENSMUST00000218879 Krtap6-2O08884 159 aa1.49□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 69.9 ms