RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Mp68P56379 58 aa6.57□□□□□ -1.36
Scn1b-203ENSMUST00000211945 Gm10272F7CZ33 110 aa6.5□□□□□ -1.37
Scn1b-203ENSMUST00000211945 Eppk1Q8R0W0 6548 aa6.49□□□□□ -1.37
Scn1b-203ENSMUST00000211945 Krtap5-2Q9D5Z7 189 aa6.47□□□□□ -1.37
Scn1b-203ENSMUST00000211945 Syne1Q6ZWR6 8799 aa6.43□□□□□ -1.38
Scn1b-203ENSMUST00000211945 Lce1kJ3QP15 125 aa6.41□□□□□ -1.38
Scn1b-203ENSMUST00000211945 Gm11559Q9D3H7 191 aa6.41□□□□□ -1.38
Scn1b-203ENSMUST00000211945 Sprr2iO70560 76 aa6.39□□□□□ -1.39
Scn1b-203ENSMUST00000211945 Gm20538F6Z9R1 75 aa6.37□□□□□ -1.39
Scn1b-203ENSMUST00000211945 Lce3bQ9CQM7 98 aa6.35□□□□□ -1.39
Scn1b-203ENSMUST00000211945 Gm11554B1AQB2 190 aa6.34□□□□□ -1.39
Scn1b-203ENSMUST00000211945 A030005L19RikA0A1Y7VIU2 113 aa6.33□□□□□ -1.4
Scn1b-203ENSMUST00000211945 Macf1Q9QXZ0 7354 aaKnown RBP6.24□□□□□ -1.41
Scn1b-203ENSMUST00000211945 Gm11568A2A4M2 211 aa6.2□□□□□ -1.42
Scn1b-203ENSMUST00000211945 Krtap9-1Q64526 186 aa6.2□□□□□ -1.42
Scn1b-203ENSMUST00000211945 Gm4553A0A1B0GSA9 284 aa6.2□□□□□ -1.42
Scn1b-203ENSMUST00000211945 Gm11938Q9D3H4 131 aa6.2□□□□□ -1.42
Scn1b-203ENSMUST00000211945 Kmt2dQ6PDK2 5588 aa6.13□□□□□ -1.43
Scn1b-203ENSMUST00000211945 Gm11639A0A1D5RLM8 5808 aa6.13□□□□□ -1.43
Scn1b-203ENSMUST00000211945 Gm2431E9Q8S1 172 aa6.03□□□□□ -1.44
Scn1b-203ENSMUST00000211945 Lce1fB9EJP6 147 aa6.01□□□□□ -1.45
Scn1b-203ENSMUST00000211945 Lce1cQ9D1C5 147 aa6.01□□□□□ -1.45
Scn1b-203ENSMUST00000211945 Ndufaf8A2AMZ4 74 aa6□□□□□ -1.45
Scn1b-203ENSMUST00000211945 Muc19Q6PZE0 7524 aa5.92□□□□□ -1.46
Scn1b-203ENSMUST00000211945 Mt1P02802 61 aaKnown RBP5.92□□□□□ -1.46
Scn1b-203ENSMUST00000211945 Gm45337A0A1B0GS71 263 aa5.9□□□□□ -1.46
Scn1b-203ENSMUST00000211945 Gpr98Q8VHN7 6298 aaKnown RBP5.85□□□□□ -1.47
Scn1b-203ENSMUST00000211945 Gm10153A0A1B0GRL1 320 aa5.84□□□□□ -1.47
Scn1b-203ENSMUST00000211945 Lce3cQ91V05 98 aa5.79□□□□□ -1.48
Scn1b-203ENSMUST00000211945 Sprr2dO70555 85 aa5.76□□□□□ -1.49
Scn1b-203ENSMUST00000211945 Hmcn1D3YXG0 5634 aa5.73□□□□□ -1.49
Scn1b-203ENSMUST00000211945 Lce3dE9Q8V1 98 aa5.72□□□□□ -1.49
Scn1b-203ENSMUST00000211945 Krtap19-4Q925H7 84 aa5.72□□□□□ -1.49
Scn1b-203ENSMUST00000211945 Gm40460A0A1B0GR10 244 aa5.7□□□□□ -1.5
Scn1b-203ENSMUST00000211945 Gm7579A0A1B0GRJ4 243 aa5.7□□□□□ -1.5
Scn1b-203ENSMUST00000211945 Krtap5-5Q2TA51 241 aa5.7□□□□□ -1.5
Scn1b-203ENSMUST00000211945 Krtap5-4Q62220 223 aa5.7□□□□□ -1.5
Scn1b-203ENSMUST00000211945 Gm39115A0A1B0GSH7 232 aa5.64□□□□□ -1.51
Scn1b-203ENSMUST00000211945 ObscnA2AAJ9 8891 aaKnown RBP5.61□□□□□ -1.51
Scn1b-203ENSMUST00000211945 Lce3eF8VQJ0 98 aa5.6□□□□□ -1.51
Scn1b-203ENSMUST00000211945 Lce3fQ6PAI4 98 aa5.6□□□□□ -1.51
Scn1b-203ENSMUST00000211945 DstQ91ZU6 7393 aaKnown RBP5.57□□□□□ -1.52
Scn1b-203ENSMUST00000211945 NebE9Q1W3 7152 aa5.45□□□□□ -1.54
Scn1b-203ENSMUST00000211945 Mt3P28184 68 aa5.41□□□□□ -1.54
Scn1b-203ENSMUST00000211945 Krtap4-16Q91W93 202 aa5.4□□□□□ -1.54
Scn1b-203ENSMUST00000211945 4933428G20RikQ9D3X4 101 aa5.37□□□□□ -1.55
Scn1b-203ENSMUST00000211945 Lce3aQ497I5 98 aa5.36□□□□□ -1.55
Scn1b-203ENSMUST00000211945 Gm9112A2AI92 75 aa5.31□□□□□ -1.56
Scn1b-203ENSMUST00000211945 Gm45618A0A1B0GSA0 219 aa5.28□□□□□ -1.56
Scn1b-203ENSMUST00000211945 Sprr2fO70557 76 aa5.28□□□□□ -1.56
Scn1b-203ENSMUST00000211945 A0A1Y7VLE6 161 aa5.28□□□□□ -1.56
Scn1b-203ENSMUST00000211945 Gm10100J3QK64 120 aa5.21□□□□□ -1.58
Scn1b-203ENSMUST00000211945 AhnakE9Q616 5656 aaKnown RBP5.16□□□□□ -1.58
Scn1b-203ENSMUST00000211945 Gm10142J3KMP7 120 aa5.04□□□□□ -1.6
Scn1b-203ENSMUST00000211945 Sprr2hO70559 108 aa4.96□□□□□ -1.62
Scn1b-203ENSMUST00000211945 Sprr2eO70556 76 aa4.73□□□□□ -1.65
Scn1b-203ENSMUST00000211945 Gm10024A0A0A0MQA4 119 aa4.71□□□□□ -1.66
Scn1b-203ENSMUST00000211945 A0A1Y7VJ07 166 aa4.41□□□□□ -1.7
Scn1b-203ENSMUST00000211945 1110025L11RikO09048 78 aa4.33□□□□□ -1.72
Scn1b-203ENSMUST00000211945 Krtap6-5Q925H3 78 aa4.33□□□□□ -1.72
Scn1b-203ENSMUST00000211945 Muc16A0A140LJ72 8478 aa4.23□□□□□ -1.73
Scn1b-203ENSMUST00000211945 Gm29735A0A1B0GT06 219 aa4.23□□□□□ -1.73
Scn1b-203ENSMUST00000211945 Krtap31-1Q9D644 177 aa4.07□□□□□ -1.76
Scn1b-203ENSMUST00000211945 Gm11567Q9D141 195 aa4□□□□□ -1.77
Scn1b-203ENSMUST00000211945 Gm10229O08631 77 aa3.86□□□□□ -1.79
Scn1b-203ENSMUST00000211945 Krtap28-13A0A087WQP5 138 aa3.62□□□□□ -1.83
Scn1b-203ENSMUST00000211945 A030005K14RikA0A1Y7VNY1 122 aa3.6□□□□□ -1.83
Scn1b-203ENSMUST00000211945 Krtap28-10A0A1Y7VP58 119 aa3.54□□□□□ -1.84
Scn1b-203ENSMUST00000211945 Krtap21-1Q925H4 128 aa3.53□□□□□ -1.84
Scn1b-203ENSMUST00000211945 Sprr2bO70554 98 aa3.52□□□□□ -1.85
Scn1b-203ENSMUST00000211945 A030003K21RikA0A1Y7VIM3 128 aa3.46□□□□□ -1.86
Scn1b-203ENSMUST00000211945 Krtap31-2Q8CAY5 177 aa3.41□□□□□ -1.86
Scn1b-203ENSMUST00000211945 Krtap6-2O08884 159 aa3.39□□□□□ -1.87
Scn1b-203ENSMUST00000211945 A030014E15RikA0A1Y7VJV2 120 aa3.33□□□□□ -1.88
Scn1b-203ENSMUST00000211945 Krtap5-1Q64507 230 aa3.3□□□□□ -1.88
Scn1b-203ENSMUST00000211945 Gm7544A0A1Y7VJ58 118 aa3.21□□□□□ -1.9
Scn1b-203ENSMUST00000211945 A0A286YCP9 139 aa3.17□□□□□ -1.9
Scn1b-203ENSMUST00000211945 Phgr1Q8K0G7 91 aa2.97□□□□□ -1.93
Scn1b-203ENSMUST00000211945 Gm6217A0A1Y7VJK9 128 aa2.6□□□□□ -1.99
Scn1b-203ENSMUST00000211945 Gm4559A4IF42 199 aa2.44□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 6.2 ms