RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Sprr2gO70558 76 aa8.32□□□□□ -1.08
Pcf11-205ENSMUST00000208255 Lce1dQ9D731 133 aa8.27□□□□□ -1.09
Pcf11-205ENSMUST00000208255 A030005K14RikA0A1Y7VNY1 122 aa8.2□□□□□ -1.1
Pcf11-205ENSMUST00000208255 Lce3bQ9CQM7 98 aa8.15□□□□□ -1.11
Pcf11-205ENSMUST00000208255 Syne1Q6ZWR6 8799 aa8.11□□□□□ -1.11
Pcf11-205ENSMUST00000208255 Lce1a1Q9CQH5 143 aa8.09□□□□□ -1.11
Pcf11-205ENSMUST00000208255 Krtap20-2E9Q0A8 60 aa8.06□□□□□ -1.12
Pcf11-205ENSMUST00000208255 Sprr2iO70560 76 aa8.05□□□□□ -1.12
Pcf11-205ENSMUST00000208255 Gm11938Q9D3H4 131 aa8.04□□□□□ -1.12
Pcf11-205ENSMUST00000208255 A030005L19RikA0A1Y7VIU2 113 aa8.01□□□□□ -1.13
Pcf11-205ENSMUST00000208255 Lce1kJ3QP15 125 aa7.99□□□□□ -1.13
Pcf11-205ENSMUST00000208255 Krtap5-2Q9D5Z7 189 aa7.97□□□□□ -1.13
Pcf11-205ENSMUST00000208255 Gm20538F6Z9R1 75 aa7.85□□□□□ -1.15
Pcf11-205ENSMUST00000208255 Sprr2dO70555 85 aa7.75□□□□□ -1.17
Pcf11-205ENSMUST00000208255 Gm11568A2A4M2 211 aa7.74□□□□□ -1.17
Pcf11-205ENSMUST00000208255 Krtap9-1Q64526 186 aa7.74□□□□□ -1.17
Pcf11-205ENSMUST00000208255 Lce1eQ9D139 143 aa7.73□□□□□ -1.17
Pcf11-205ENSMUST00000208255 Ndufaf8A2AMZ4 74 aa7.67□□□□□ -1.18
Pcf11-205ENSMUST00000208255 Lce1fB9EJP6 147 aa7.67□□□□□ -1.18
Pcf11-205ENSMUST00000208255 Lce1cQ9D1C5 147 aa7.67□□□□□ -1.18
Pcf11-205ENSMUST00000208255 Gm11559Q9D3H7 191 aa7.61□□□□□ -1.19
Pcf11-205ENSMUST00000208255 Gm7544A0A1Y7VJ58 118 aa7.58□□□□□ -1.2
Pcf11-205ENSMUST00000208255 Gm4553A0A1B0GSA9 284 aa7.52□□□□□ -1.2
Pcf11-205ENSMUST00000208255 Krtap19-4Q925H7 84 aa7.51□□□□□ -1.21
Pcf11-205ENSMUST00000208255 Mt1P02802 61 aaKnown RBP7.49□□□□□ -1.21
Pcf11-205ENSMUST00000208255 Lce3cQ91V05 98 aa7.46□□□□□ -1.22
Pcf11-205ENSMUST00000208255 A0A1Y7VJ07 166 aa7.43□□□□□ -1.22
Pcf11-205ENSMUST00000208255 Gm11554B1AQB2 190 aa7.35□□□□□ -1.23
Pcf11-205ENSMUST00000208255 Lce3dE9Q8V1 98 aa7.35□□□□□ -1.23
Pcf11-205ENSMUST00000208255 Macf1Q9QXZ0 7354 aaKnown RBP7.32□□□□□ -1.24
Pcf11-205ENSMUST00000208255 Gm45337A0A1B0GS71 263 aa7.3□□□□□ -1.24
Pcf11-205ENSMUST00000208255 Gm10153A0A1B0GRL1 320 aa7.27□□□□□ -1.25
Pcf11-205ENSMUST00000208255 Gm2431E9Q8S1 172 aa7.24□□□□□ -1.25
Pcf11-205ENSMUST00000208255 Lce3eF8VQJ0 98 aa7.24□□□□□ -1.25
Pcf11-205ENSMUST00000208255 Lce3fQ6PAI4 98 aa7.24□□□□□ -1.25
Pcf11-205ENSMUST00000208255 ObscnA2AAJ9 8891 aaKnown RBP7.19□□□□□ -1.26
Pcf11-205ENSMUST00000208255 4933428G20RikQ9D3X4 101 aa7.18□□□□□ -1.26
Pcf11-205ENSMUST00000208255 Kmt2dQ6PDK2 5588 aa7.12□□□□□ -1.27
Pcf11-205ENSMUST00000208255 A030014E15RikA0A1Y7VJV2 120 aa7.11□□□□□ -1.27
Pcf11-205ENSMUST00000208255 Gm40460A0A1B0GR10 244 aa7.06□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Gm7579A0A1B0GRJ4 243 aa7.06□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Krtap5-5Q2TA51 241 aa7.06□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Krtap5-4Q62220 223 aa7.06□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Gm10100J3QK64 120 aa7.05□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Eppk1Q8R0W0 6548 aa7.04□□□□□ -1.28
Pcf11-205ENSMUST00000208255 Hmcn1D3YXG0 5634 aa6.94□□□□□ -1.3
Pcf11-205ENSMUST00000208255 Lce3aQ497I5 98 aa6.93□□□□□ -1.3
Pcf11-205ENSMUST00000208255 A030003K21RikA0A1Y7VIM3 128 aa6.9□□□□□ -1.3
Pcf11-205ENSMUST00000208255 Mt3P28184 68 aa6.87□□□□□ -1.31
Pcf11-205ENSMUST00000208255 Gm10142J3KMP7 120 aa6.85□□□□□ -1.31
Pcf11-205ENSMUST00000208255 Gm39115A0A1B0GSH7 232 aa6.8□□□□□ -1.32
Pcf11-205ENSMUST00000208255 Sprr2hO70559 108 aa6.71□□□□□ -1.34
Pcf11-205ENSMUST00000208255 Muc19Q6PZE0 7524 aa6.6□□□□□ -1.35
Pcf11-205ENSMUST00000208255 Gm11639A0A1D5RLM8 5808 aa6.58□□□□□ -1.36
Pcf11-205ENSMUST00000208255 Gm6217A0A1Y7VJK9 128 aa6.54□□□□□ -1.36
Pcf11-205ENSMUST00000208255 Gm9112A2AI92 75 aa6.53□□□□□ -1.36
Pcf11-205ENSMUST00000208255 DstQ91ZU6 7393 aaKnown RBP6.47□□□□□ -1.37
Pcf11-205ENSMUST00000208255 Sprr2fO70557 76 aa6.28□□□□□ -1.4
Pcf11-205ENSMUST00000208255 Sprr2eO70556 76 aa6.22□□□□□ -1.41
Pcf11-205ENSMUST00000208255 Gpr98Q8VHN7 6298 aaKnown RBP6.19□□□□□ -1.42
Pcf11-205ENSMUST00000208255 Gm45618A0A1B0GSA0 219 aa6.19□□□□□ -1.42
Pcf11-205ENSMUST00000208255 A0A286YCP9 139 aa6.16□□□□□ -1.42
Pcf11-205ENSMUST00000208255 Krtap4-16Q91W93 202 aa6.15□□□□□ -1.42
Pcf11-205ENSMUST00000208255 NebE9Q1W3 7152 aa6.05□□□□□ -1.44
Pcf11-205ENSMUST00000208255 AhnakE9Q616 5656 aaKnown RBP6.03□□□□□ -1.44
Pcf11-205ENSMUST00000208255 Gm10024A0A0A0MQA4 119 aa5.96□□□□□ -1.45
Pcf11-205ENSMUST00000208255 Krtap31-1Q9D644 177 aa5.78□□□□□ -1.48
Pcf11-205ENSMUST00000208255 1110025L11RikO09048 78 aa5.51□□□□□ -1.53
Pcf11-205ENSMUST00000208255 Krtap6-5Q925H3 78 aa5.51□□□□□ -1.53
Pcf11-205ENSMUST00000208255 Muc16A0A140LJ72 8478 aa5.28□□□□□ -1.56
Pcf11-205ENSMUST00000208255 Gm29735A0A1B0GT06 219 aa5.25□□□□□ -1.57
Pcf11-205ENSMUST00000208255 Gm11567Q9D141 195 aa5□□□□□ -1.61
Pcf11-205ENSMUST00000208255 Gm10229O08631 77 aa4.93□□□□□ -1.62
Pcf11-205ENSMUST00000208255 Krtap31-2Q8CAY5 177 aa4.91□□□□□ -1.62
Pcf11-205ENSMUST00000208255 Sprr2bO70554 98 aa4.66□□□□□ -1.66
Pcf11-205ENSMUST00000208255 Krtap21-1Q925H4 128 aa4.5□□□□□ -1.69
Pcf11-205ENSMUST00000208255 Krtap6-2O08884 159 aa4.31□□□□□ -1.72
Pcf11-205ENSMUST00000208255 Phgr1Q8K0G7 91 aa3.99□□□□□ -1.77
Pcf11-205ENSMUST00000208255 Krtap5-1Q64507 230 aa3.72□□□□□ -1.81
Pcf11-205ENSMUST00000208255 Gm4559A4IF42 199 aa3.3□□□□□ -1.88
Retrieved 80 of 22,080 RNA–protein pairs in 6.2 ms