RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Lce1kJ3QP15 125 aa5.94□□□□□ -1.46
Trim54-202ENSMUST00000202769 Gm11559Q9D3H7 191 aa5.94□□□□□ -1.46
Trim54-202ENSMUST00000202769 A030005L19RikA0A1Y7VIU2 113 aa5.86□□□□□ -1.47
Trim54-202ENSMUST00000202769 Gm11554B1AQB2 190 aa5.82□□□□□ -1.48
Trim54-202ENSMUST00000202769 Syne1Q6ZWR6 8799 aa5.79□□□□□ -1.48
Trim54-202ENSMUST00000202769 Gm4553A0A1B0GSA9 284 aa5.79□□□□□ -1.48
Trim54-202ENSMUST00000202769 Gm11568A2A4M2 211 aa5.79□□□□□ -1.48
Trim54-202ENSMUST00000202769 Krtap9-1Q64526 186 aa5.79□□□□□ -1.48
Trim54-202ENSMUST00000202769 Lce3bQ9CQM7 98 aa5.78□□□□□ -1.48
Trim54-202ENSMUST00000202769 Gm10272F7CZ33 110 aa5.73□□□□□ -1.49
Trim54-202ENSMUST00000202769 Macf1Q9QXZ0 7354 aaKnown RBP5.72□□□□□ -1.49
Trim54-202ENSMUST00000202769 Krtap7-1Q9D3I6 87 aa5.71□□□□□ -1.5
Trim54-202ENSMUST00000202769 Kmt2dQ6PDK2 5588 aa5.68□□□□□ -1.5
Trim54-202ENSMUST00000202769 Gm40193A0A1B0GT39 78 aa5.61□□□□□ -1.51
Trim54-202ENSMUST00000202769 Gm2431E9Q8S1 172 aa5.61□□□□□ -1.51
Trim54-202ENSMUST00000202769 Gm11639A0A1D5RLM8 5808 aa5.6□□□□□ -1.51
Trim54-202ENSMUST00000202769 Lce1fB9EJP6 147 aa5.57□□□□□ -1.52
Trim54-202ENSMUST00000202769 Lce1cQ9D1C5 147 aa5.57□□□□□ -1.52
Trim54-202ENSMUST00000202769 Gm45337A0A1B0GS71 263 aa5.53□□□□□ -1.52
Trim54-202ENSMUST00000202769 Tnp1P10856 55 aa5.43□□□□□ -1.54
Trim54-202ENSMUST00000202769 Gm20538F6Z9R1 75 aa5.4□□□□□ -1.54
Trim54-202ENSMUST00000202769 Gm10153A0A1B0GRL1 320 aa5.4□□□□□ -1.55
Trim54-202ENSMUST00000202769 Mp68P56379 58 aa5.39□□□□□ -1.55
Trim54-202ENSMUST00000202769 Muc19Q6PZE0 7524 aa5.38□□□□□ -1.55
Trim54-202ENSMUST00000202769 Gm11938Q9D3H4 131 aa5.37□□□□□ -1.55
Trim54-202ENSMUST00000202769 Mt1P02802 61 aaKnown RBP5.34□□□□□ -1.55
Trim54-202ENSMUST00000202769 Hmcn1D3YXG0 5634 aa5.34□□□□□ -1.56
Trim54-202ENSMUST00000202769 Gm40460A0A1B0GR10 244 aa5.33□□□□□ -1.56
Trim54-202ENSMUST00000202769 Gm7579A0A1B0GRJ4 243 aa5.33□□□□□ -1.56
Trim54-202ENSMUST00000202769 Krtap5-5Q2TA51 241 aa5.33□□□□□ -1.56
Trim54-202ENSMUST00000202769 Krtap5-4Q62220 223 aa5.33□□□□□ -1.56
Trim54-202ENSMUST00000202769 Krtap19-4Q925H7 84 aa5.33□□□□□ -1.56
Trim54-202ENSMUST00000202769 Gpr98Q8VHN7 6298 aaKnown RBP5.32□□□□□ -1.56
Trim54-202ENSMUST00000202769 Gm39115A0A1B0GSH7 232 aa5.27□□□□□ -1.57
Trim54-202ENSMUST00000202769 Lce3cQ91V05 98 aa5.14□□□□□ -1.59
Trim54-202ENSMUST00000202769 DstQ91ZU6 7393 aaKnown RBP5.1□□□□□ -1.59
Trim54-202ENSMUST00000202769 Lce3dE9Q8V1 98 aa5.06□□□□□ -1.6
Trim54-202ENSMUST00000202769 Krtap4-16Q91W93 202 aa4.97□□□□□ -1.61
Trim54-202ENSMUST00000202769 NebE9Q1W3 7152 aa4.97□□□□□ -1.61
Trim54-202ENSMUST00000202769 Mt3P28184 68 aa4.94□□□□□ -1.62
Trim54-202ENSMUST00000202769 Gm45618A0A1B0GSA0 219 aa4.92□□□□□ -1.62
Trim54-202ENSMUST00000202769 Ndufaf8A2AMZ4 74 aa4.92□□□□□ -1.62
Trim54-202ENSMUST00000202769 Lce3eF8VQJ0 98 aa4.89□□□□□ -1.63
Trim54-202ENSMUST00000202769 Lce3fQ6PAI4 98 aa4.89□□□□□ -1.63
Trim54-202ENSMUST00000202769 Sprr2fO70557 76 aa4.88□□□□□ -1.63
Trim54-202ENSMUST00000202769 ObscnA2AAJ9 8891 aaKnown RBP4.86□□□□□ -1.63
Trim54-202ENSMUST00000202769 AhnakE9Q616 5656 aaKnown RBP4.73□□□□□ -1.65
Trim54-202ENSMUST00000202769 A0A1Y7VLE6 161 aa4.71□□□□□ -1.66
Trim54-202ENSMUST00000202769 4933428G20RikQ9D3X4 101 aa4.71□□□□□ -1.66
Trim54-202ENSMUST00000202769 Gm10100J3QK64 120 aa4.68□□□□□ -1.66
Trim54-202ENSMUST00000202769 Lce3aQ497I5 98 aa4.68□□□□□ -1.66
Trim54-202ENSMUST00000202769 Sprr2dO70555 85 aa4.63□□□□□ -1.67
Trim54-202ENSMUST00000202769 Gm9112A2AI92 75 aa4.49□□□□□ -1.69
Trim54-202ENSMUST00000202769 Sprr2eO70556 76 aa4.34□□□□□ -1.71
Trim54-202ENSMUST00000202769 Gm10024A0A0A0MQA4 119 aa4.21□□□□□ -1.73
Trim54-202ENSMUST00000202769 Gm10142J3KMP7 120 aa4.1□□□□□ -1.75
Trim54-202ENSMUST00000202769 A0A1Y7VJ07 166 aa4.02□□□□□ -1.77
Trim54-202ENSMUST00000202769 Sprr2hO70559 108 aa3.99□□□□□ -1.77
Trim54-202ENSMUST00000202769 Muc16A0A140LJ72 8478 aa3.91□□□□□ -1.78
Trim54-202ENSMUST00000202769 Gm29735A0A1B0GT06 219 aa3.91□□□□□ -1.78
Trim54-202ENSMUST00000202769 1110025L11RikO09048 78 aa3.81□□□□□ -1.8
Trim54-202ENSMUST00000202769 Krtap6-5Q925H3 78 aa3.81□□□□□ -1.8
Trim54-202ENSMUST00000202769 Gm11567Q9D141 195 aa3.69□□□□□ -1.82
Trim54-202ENSMUST00000202769 Krtap31-1Q9D644 177 aa3.44□□□□□ -1.86
Trim54-202ENSMUST00000202769 Gm10229O08631 77 aa3.42□□□□□ -1.86
Trim54-202ENSMUST00000202769 A030003K21RikA0A1Y7VIM3 128 aa3.14□□□□□ -1.91
Trim54-202ENSMUST00000202769 Krtap6-2O08884 159 aa3.07□□□□□ -1.92
Trim54-202ENSMUST00000202769 Sprr2bO70554 98 aa3.06□□□□□ -1.92
Trim54-202ENSMUST00000202769 Krtap21-1Q925H4 128 aa3.06□□□□□ -1.92
Trim54-202ENSMUST00000202769 Krtap31-2Q8CAY5 177 aa3.05□□□□□ -1.92
Trim54-202ENSMUST00000202769 Krtap5-1Q64507 230 aa3.04□□□□□ -1.92
Trim54-202ENSMUST00000202769 Krtap28-10A0A1Y7VP58 119 aa2.85□□□□□ -1.95
Trim54-202ENSMUST00000202769 A0A286YCP9 139 aa2.67□□□□□ -1.98
Trim54-202ENSMUST00000202769 Phgr1Q8K0G7 91 aa2.45□□□□□ -2.02
Trim54-202ENSMUST00000202769 Gm6217A0A1Y7VJK9 128 aa2.34□□□□□ -2.03
Trim54-202ENSMUST00000202769 Gm4559A4IF42 199 aa2.27□□□□□ -2.05
Trim54-202ENSMUST00000202769 A030005K14RikA0A1Y7VNY1 122 aa1.44□□□□□ -2.18
Trim54-202ENSMUST00000202769 Krtap28-13A0A087WQP5 138 aa1.37□□□□□ -2.19
Trim54-202ENSMUST00000202769 A030014E15RikA0A1Y7VJV2 120 aa1.31□□□□□ -2.2
Trim54-202ENSMUST00000202769 Gm7544A0A1Y7VJ58 118 aa1.15□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 184 ms