RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Mt2P02798 61 aa2.39□□□□□ -2.03
Csde1-206ENSMUST00000197488 Gm6358A0A087WPH4 74 aa2.38□□□□□ -2.03
Csde1-206ENSMUST00000197488 Gm10061D3Z714 54 aa2.34□□□□□ -2.03
Csde1-206ENSMUST00000197488 Muc16A0A140LJ72 8478 aa2.34□□□□□ -2.03
Csde1-206ENSMUST00000197488 Sprr2kO70562 68 aa2.33□□□□□ -2.04
Csde1-206ENSMUST00000197488 Gm10272F7CZ33 110 aa2.33□□□□□ -2.04
Csde1-206ENSMUST00000197488 Gm11569B1AQB1 180 aa2.31□□□□□ -2.04
Csde1-206ENSMUST00000197488 4933428G20RikQ9D3X4 101 aa2.31□□□□□ -2.04
Csde1-206ENSMUST00000197488 Macf1Q9QXZ0 7354 aaKnown RBP2.29□□□□□ -2.04
Csde1-206ENSMUST00000197488 Muc5bE9Q5I3 4800 aa2.27□□□□□ -2.05
Csde1-206ENSMUST00000197488 Gm10142J3KMP7 120 aa2.26□□□□□ -2.05
Csde1-206ENSMUST00000197488 Gm45618A0A1B0GSA0 219 aa2.26□□□□□ -2.05
Csde1-206ENSMUST00000197488 Krtap4-9B1AQA9 244 aa2.25□□□□□ -2.05
Csde1-206ENSMUST00000197488 2300003K06RikA2A4M0 262 aa2.23□□□□□ -2.05
Csde1-206ENSMUST00000197488 Gm2431E9Q8S1 172 aa2.23□□□□□ -2.05
Csde1-206ENSMUST00000197488 Krtap22-2J3QNX6 67 aa2.23□□□□□ -2.05
Csde1-206ENSMUST00000197488 Sprr2gO70558 76 aa2.23□□□□□ -2.05
Csde1-206ENSMUST00000197488 Krtap4-6Q3V4B7 195 aa2.22□□□□□ -2.05
Csde1-206ENSMUST00000197488 Gm11938Q9D3H4 131 aa2.22□□□□□ -2.05
Csde1-206ENSMUST00000197488 Gm11595B1AQA7 289 aa2.21□□□□□ -2.06
Csde1-206ENSMUST00000197488 Syne2Q6ZWQ0 6874 aaKnown RBP2.21□□□□□ -2.06
Csde1-206ENSMUST00000197488 Gm39115A0A1B0GSH7 232 aa2.2□□□□□ -2.06
Csde1-206ENSMUST00000197488 Lce1cQ9D1C5 147 aa2.2□□□□□ -2.06
Csde1-206ENSMUST00000197488 Gm11562A0PK51 136 aa2.19□□□□□ -2.06
Csde1-206ENSMUST00000197488 Lce1fB9EJP6 147 aa2.18□□□□□ -2.06
Csde1-206ENSMUST00000197488 Lce3bQ9CQM7 98 aa2.17□□□□□ -2.06
Csde1-206ENSMUST00000197488 Gm11567Q9D141 195 aa2.16□□□□□ -2.06
Csde1-206ENSMUST00000197488 Mt4P47945 62 aa2.15□□□□□ -2.06
Csde1-206ENSMUST00000197488 Gm11554B1AQB2 190 aa2.14□□□□□ -2.07
Csde1-206ENSMUST00000197488 Sprr2dO70555 85 aa2.13□□□□□ -2.07
Csde1-206ENSMUST00000197488 Lce3cQ91V05 98 aa2.09□□□□□ -2.07
Csde1-206ENSMUST00000197488 Gm11596B1AQB0 205 aa2.09□□□□□ -2.08
Csde1-206ENSMUST00000197488 Lce3dE9Q8V1 98 aa2.07□□□□□ -2.08
Csde1-206ENSMUST00000197488 Gm11564A2A4L9 201 aa2.06□□□□□ -2.08
Csde1-206ENSMUST00000197488 Krtap4-8B1AQA8 209 aa2.06□□□□□ -2.08
Csde1-206ENSMUST00000197488 Gm29735A0A1B0GT06 219 aa2.05□□□□□ -2.08
Csde1-206ENSMUST00000197488 Lce3eF8VQJ0 98 aa2.03□□□□□ -2.08
Csde1-206ENSMUST00000197488 Lce3fQ6PAI4 98 aa2.03□□□□□ -2.08
Csde1-206ENSMUST00000197488 Krtap4-13Q9D7P3 165 aa2.03□□□□□ -2.08
Csde1-206ENSMUST00000197488 Krtap19-4Q925H7 84 aa2.02□□□□□ -2.09
Csde1-206ENSMUST00000197488 ObscnA2AAJ9 8891 aaKnown RBP1.99□□□□□ -2.09
Csde1-206ENSMUST00000197488 Lce3aQ497I5 98 aa1.98□□□□□ -2.09
Csde1-206ENSMUST00000197488 Muc19Q6PZE0 7524 aa1.97□□□□□ -2.09
Csde1-206ENSMUST00000197488 DstQ91ZU6 7393 aaKnown RBP1.96□□□□□ -2.1
Csde1-206ENSMUST00000197488 Sprr2hO70559 108 aa1.93□□□□□ -2.1
Csde1-206ENSMUST00000197488 Krtap4-16Q91W93 202 aa1.93□□□□□ -2.1
Csde1-206ENSMUST00000197488 Sprr2iO70560 76 aa1.93□□□□□ -2.1
Csde1-206ENSMUST00000197488 Gm10153A0A1B0GRL1 320 aa1.91□□□□□ -2.1
Csde1-206ENSMUST00000197488 NebE9Q1W3 7152 aa1.9□□□□□ -2.1
Csde1-206ENSMUST00000197488 Mt3P28184 68 aa1.89□□□□□ -2.11
Csde1-206ENSMUST00000197488 Sprr2fO70557 76 aa1.86□□□□□ -2.11
Csde1-206ENSMUST00000197488 Sprr2eO70556 76 aa1.85□□□□□ -2.11
Csde1-206ENSMUST00000197488 Krtap5-4Q62220 223 aa1.82□□□□□ -2.12
Csde1-206ENSMUST00000197488 Krtap20-2E9Q0A8 60 aa1.76□□□□□ -2.13
Csde1-206ENSMUST00000197488 Gm45337A0A1B0GS71 263 aa1.76□□□□□ -2.13
Csde1-206ENSMUST00000197488 Gm10024A0A0A0MQA4 119 aa1.75□□□□□ -2.13
Csde1-206ENSMUST00000197488 Mt1P02802 61 aaKnown RBP1.74□□□□□ -2.13
Csde1-206ENSMUST00000197488 Hmcn1D3YXG0 5634 aa1.73□□□□□ -2.13
Csde1-206ENSMUST00000197488 Krtap6-3A0A087WQL6 57 aa1.71□□□□□ -2.14
Csde1-206ENSMUST00000197488 Krtap9-1Q64526 186 aa1.66□□□□□ -2.14
Csde1-206ENSMUST00000197488 Kmt2dQ6PDK2 5588 aa1.64□□□□□ -2.15
Csde1-206ENSMUST00000197488 Gm11568A2A4M2 211 aa1.61□□□□□ -2.15
Csde1-206ENSMUST00000197488 Eppk1Q8R0W0 6548 aa1.59□□□□□ -2.16
Csde1-206ENSMUST00000197488 Gm11639A0A1D5RLM8 5808 aa1.58□□□□□ -2.16
Csde1-206ENSMUST00000197488 Krtap5-1Q64507 230 aa1.54□□□□□ -2.16
Csde1-206ENSMUST00000197488 Gpr98Q8VHN7 6298 aaKnown RBP1.54□□□□□ -2.16
Csde1-206ENSMUST00000197488 Gm4553A0A1B0GSA9 284 aa1.49□□□□□ -2.17
Csde1-206ENSMUST00000197488 Gm7579A0A1B0GRJ4 243 aa1.47□□□□□ -2.17
Csde1-206ENSMUST00000197488 Krtap5-2Q9D5Z7 189 aa1.45□□□□□ -2.18
Csde1-206ENSMUST00000197488 Gm4559A4IF42 199 aa1.44□□□□□ -2.18
Csde1-206ENSMUST00000197488 1110025L11RikO09048 78 aa1.36□□□□□ -2.19
Csde1-206ENSMUST00000197488 Krtap6-5Q925H3 78 aa1.36□□□□□ -2.19
Csde1-206ENSMUST00000197488 Gm40460A0A1B0GR10 244 aa1.35□□□□□ -2.19
Csde1-206ENSMUST00000197488 Krtap5-5Q2TA51 241 aa1.35□□□□□ -2.19
Csde1-206ENSMUST00000197488 Gm10229O08631 77 aa1.33□□□□□ -2.2
Csde1-206ENSMUST00000197488 Sprr2bO70554 98 aa1.3□□□□□ -2.2
Csde1-206ENSMUST00000197488 AhnakE9Q616 5656 aaKnown RBP1.24□□□□□ -2.21
Csde1-206ENSMUST00000197488 Phgr1Q8K0G7 91 aa1.19□□□□□ -2.22
Csde1-206ENSMUST00000197488 Krtap21-1Q925H4 128 aa1.1□□□□□ -2.23
Csde1-206ENSMUST00000197488 Krtap6-2O08884 159 aa1.06□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 62 ms