RNA–Protein interactions for RNA: ENSMUST00000176778.7

Cux1-212, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cux1, Length 5,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-212ENSMUST00000176778 Lce1a2Q9D1K4 149 aa5.04□□□□□ -1.6
Cux1-212ENSMUST00000176778 Mt4P47945 62 aa5.02□□□□□ -1.61
Cux1-212ENSMUST00000176778 Krtap4-1Q3UUY3 169 aa5.01□□□□□ -1.61
Cux1-212ENSMUST00000176778 Syne1Q6ZWR6 8799 aa4.99□□□□□ -1.61
Cux1-212ENSMUST00000176778 Gm11562A0PK51 136 aa4.95□□□□□ -1.62
Cux1-212ENSMUST00000176778 Gm11564A2A4L9 201 aa4.91□□□□□ -1.62
Cux1-212ENSMUST00000176778 Gm11563B1AQ90 168 aa4.91□□□□□ -1.62
Cux1-212ENSMUST00000176778 Gm11595B1AQA7 289 aa4.91□□□□□ -1.62
Cux1-212ENSMUST00000176778 Krtap4-8B1AQA8 209 aa4.91□□□□□ -1.62
Cux1-212ENSMUST00000176778 SspoQ8CG65 4998 aa4.87□□□□□ -1.63
Cux1-212ENSMUST00000176778 Krtap4-9B1AQA9 244 aa4.83□□□□□ -1.64
Cux1-212ENSMUST00000176778 Krtap17-1A2A5X6 109 aa4.83□□□□□ -1.64
Cux1-212ENSMUST00000176778 Syne2Q6ZWQ0 6874 aaKnown RBP4.75□□□□□ -1.65
Cux1-212ENSMUST00000176778 2300003K06RikA2A4M0 262 aa4.7□□□□□ -1.66
Cux1-212ENSMUST00000176778 Krtap4-7Q9D732 168 aa4.66□□□□□ -1.66
Cux1-212ENSMUST00000176778 Krtap4-13Q9D7P3 165 aa4.65□□□□□ -1.67
Cux1-212ENSMUST00000176778 Sprr2hO70559 108 aa4.65□□□□□ -1.67
Cux1-212ENSMUST00000176778 Krtap31-2Q8CAY5 177 aa4.61□□□□□ -1.67
Cux1-212ENSMUST00000176778 Krtap6-3A0A087WQL6 57 aa4.57□□□□□ -1.68
Cux1-212ENSMUST00000176778 Sprr2dO70555 85 aa4.56□□□□□ -1.68
Cux1-212ENSMUST00000176778 Fsip2A2ARZ3 6995 aa4.49□□□□□ -1.69
Cux1-212ENSMUST00000176778 Gm11938Q9D3H4 131 aa4.47□□□□□ -1.69
Cux1-212ENSMUST00000176778 Gm11555B1AQ89 175 aa4.46□□□□□ -1.7
Cux1-212ENSMUST00000176778 Krtap31-1Q9D644 177 aa4.46□□□□□ -1.7
Cux1-212ENSMUST00000176778 Lce1kJ3QP15 125 aa4.43□□□□□ -1.7
Cux1-212ENSMUST00000176778 Mt3P28184 68 aa4.42□□□□□ -1.7
Cux1-212ENSMUST00000176778 Muc16A0A140LJ72 8478 aa4.39□□□□□ -1.71
Cux1-212ENSMUST00000176778 Lce1a1Q9CQH5 143 aa4.32□□□□□ -1.72
Cux1-212ENSMUST00000176778 Sprr2bO70554 98 aa4.21□□□□□ -1.74
Cux1-212ENSMUST00000176778 Eppk1Q8R0W0 6548 aa4.14□□□□□ -1.75
Cux1-212ENSMUST00000176778 Krtap20-2E9Q0A8 60 aa4.11□□□□□ -1.75
Cux1-212ENSMUST00000176778 Krtap4-16Q91W93 202 aa4.07□□□□□ -1.76
Cux1-212ENSMUST00000176778 Mt1P02802 61 aaKnown RBP4.05□□□□□ -1.76
Cux1-212ENSMUST00000176778 ObscnA2AAJ9 8891 aaKnown RBP4.04□□□□□ -1.76
Cux1-212ENSMUST00000176778 Gm11554B1AQB2 190 aa4.02□□□□□ -1.77
Cux1-212ENSMUST00000176778 Macf1Q9QXZ0 7354 aaKnown RBP3.97□□□□□ -1.77
Cux1-212ENSMUST00000176778 DstQ91ZU6 7393 aaKnown RBP3.78□□□□□ -1.8
Cux1-212ENSMUST00000176778 NebE9Q1W3 7152 aa3.7□□□□□ -1.82
Cux1-212ENSMUST00000176778 Gm11559Q9D3H7 191 aa3.63□□□□□ -1.83
Cux1-212ENSMUST00000176778 Kmt2dQ6PDK2 5588 aa3.61□□□□□ -1.83
Cux1-212ENSMUST00000176778 Gm11568A2A4M2 211 aa3.54□□□□□ -1.84
Cux1-212ENSMUST00000176778 Krtap9-1Q64526 186 aa3.54□□□□□ -1.84
Cux1-212ENSMUST00000176778 Krtap5-2Q9D5Z7 189 aa3.51□□□□□ -1.85
Cux1-212ENSMUST00000176778 Muc19Q6PZE0 7524 aa3.42□□□□□ -1.86
Cux1-212ENSMUST00000176778 Gpr98Q8VHN7 6298 aaKnown RBP3.35□□□□□ -1.87
Cux1-212ENSMUST00000176778 Gm4553A0A1B0GSA9 284 aa3.33□□□□□ -1.88
Cux1-212ENSMUST00000176778 Gm11639A0A1D5RLM8 5808 aa3.31□□□□□ -1.88
Cux1-212ENSMUST00000176778 1110025L11RikO09048 78 aa3.25□□□□□ -1.89
Cux1-212ENSMUST00000176778 Krtap6-5Q925H3 78 aa3.25□□□□□ -1.89
Cux1-212ENSMUST00000176778 A030005L19RikA0A1Y7VIU2 113 aa3.2□□□□□ -1.9
Cux1-212ENSMUST00000176778 Hmcn1D3YXG0 5634 aa3.18□□□□□ -1.9
Cux1-212ENSMUST00000176778 Gm10229O08631 77 aa3.1□□□□□ -1.91
Cux1-212ENSMUST00000176778 Gm2431E9Q8S1 172 aa3.1□□□□□ -1.91
Cux1-212ENSMUST00000176778 Gm45337A0A1B0GS71 263 aa3.05□□□□□ -1.92
Cux1-212ENSMUST00000176778 Gm10153A0A1B0GRL1 320 aa3.04□□□□□ -1.92
Cux1-212ENSMUST00000176778 A0A1Y7VJH8 109 aa3.02□□□□□ -1.93
Cux1-212ENSMUST00000176778 Gm40460A0A1B0GR10 244 aa3.01□□□□□ -1.93
Cux1-212ENSMUST00000176778 Gm7579A0A1B0GRJ4 243 aa3.01□□□□□ -1.93
Cux1-212ENSMUST00000176778 Krtap5-5Q2TA51 241 aa3.01□□□□□ -1.93
Cux1-212ENSMUST00000176778 Krtap5-4Q62220 223 aa3.01□□□□□ -1.93
Cux1-212ENSMUST00000176778 AhnakE9Q616 5656 aaKnown RBP2.94□□□□□ -1.94
Cux1-212ENSMUST00000176778 Phgr1Q8K0G7 91 aa2.91□□□□□ -1.94
Cux1-212ENSMUST00000176778 Gm39115A0A1B0GSH7 232 aa2.84□□□□□ -1.95
Cux1-212ENSMUST00000176778 Gm45618A0A1B0GSA0 219 aa2.55□□□□□ -2
Cux1-212ENSMUST00000176778 Krtap6-2O08884 159 aa2.5□□□□□ -2.01
Cux1-212ENSMUST00000176778 Gm11567Q9D141 195 aa2.48□□□□□ -2.01
Cux1-212ENSMUST00000176778 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Cux1-212ENSMUST00000176778 A0A1Y7VLE6 161 aa2.33□□□□□ -2.04
Cux1-212ENSMUST00000176778 Gm29735A0A1B0GT06 219 aa2.26□□□□□ -2.05
Cux1-212ENSMUST00000176778 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Cux1-212ENSMUST00000176778 A0A286YCP9 139 aa1.65□□□□□ -2.15
Cux1-212ENSMUST00000176778 Krtap5-1Q64507 230 aa1.64□□□□□ -2.15
Cux1-212ENSMUST00000176778 A030003K21RikA0A1Y7VIM3 128 aa1.41□□□□□ -2.18
Cux1-212ENSMUST00000176778 Krtap28-10A0A1Y7VP58 119 aa1.29□□□□□ -2.2
Cux1-212ENSMUST00000176778 Gm6217A0A1Y7VJK9 128 aa1.22□□□□□ -2.21
Cux1-212ENSMUST00000176778 Gm4559A4IF42 199 aa1.19□□□□□ -2.22
Cux1-212ENSMUST00000176778 Krtap28-13A0A087WQP5 138 aa1.07□□□□□ -2.24
Cux1-212ENSMUST00000176778 A030005K14RikA0A1Y7VNY1 122 aa1.02□□□□□ -2.25
Cux1-212ENSMUST00000176778 Gm7544A0A1Y7VJ58 118 aa0.95□□□□□ -2.26
Cux1-212ENSMUST00000176778 A030014E15RikA0A1Y7VJV2 120 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 71.2 ms