RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Sprr2hO70559 108 aa5□□□□□ -1.61
Cux1-206ENSMUST00000176172 Krtap4-1Q3UUY3 169 aa4.99□□□□□ -1.61
Cux1-206ENSMUST00000176172 Muc5bE9Q5I3 4800 aa4.95□□□□□ -1.62
Cux1-206ENSMUST00000176172 Gm11562A0PK51 136 aa4.92□□□□□ -1.62
Cux1-206ENSMUST00000176172 Muc16A0A140LJ72 8478 aa4.91□□□□□ -1.62
Cux1-206ENSMUST00000176172 Hmcn2A2AJ76 5100 aa4.91□□□□□ -1.62
Cux1-206ENSMUST00000176172 Gm11596B1AQB0 205 aa4.9□□□□□ -1.62
Cux1-206ENSMUST00000176172 Krtap4-9B1AQA9 244 aa4.9□□□□□ -1.63
Cux1-206ENSMUST00000176172 Gm11564A2A4L9 201 aa4.89□□□□□ -1.63
Cux1-206ENSMUST00000176172 Gm11563B1AQ90 168 aa4.89□□□□□ -1.63
Cux1-206ENSMUST00000176172 Gm11595B1AQA7 289 aa4.89□□□□□ -1.63
Cux1-206ENSMUST00000176172 Krtap4-8B1AQA8 209 aa4.89□□□□□ -1.63
Cux1-206ENSMUST00000176172 2300003K06RikA2A4M0 262 aa4.89□□□□□ -1.63
Cux1-206ENSMUST00000176172 Gm11938Q9D3H4 131 aa4.88□□□□□ -1.63
Cux1-206ENSMUST00000176172 Krtap31-1Q9D644 177 aa4.87□□□□□ -1.63
Cux1-206ENSMUST00000176172 Krtap17-1A2A5X6 109 aa4.85□□□□□ -1.63
Cux1-206ENSMUST00000176172 Krtap4-7Q9D732 168 aa4.84□□□□□ -1.63
Cux1-206ENSMUST00000176172 Ush2AQ2QI47 5193 aa4.81□□□□□ -1.64
Cux1-206ENSMUST00000176172 Fsip2A2ARZ3 6995 aa4.78□□□□□ -1.64
Cux1-206ENSMUST00000176172 Lce1kJ3QP15 125 aa4.77□□□□□ -1.65
Cux1-206ENSMUST00000176172 Krtap4-13Q9D7P3 165 aa4.74□□□□□ -1.65
Cux1-206ENSMUST00000176172 Mt3P28184 68 aa4.67□□□□□ -1.66
Cux1-206ENSMUST00000176172 Syne2Q6ZWQ0 6874 aaKnown RBP4.66□□□□□ -1.66
Cux1-206ENSMUST00000176172 ObscnA2AAJ9 8891 aaKnown RBP4.59□□□□□ -1.67
Cux1-206ENSMUST00000176172 SspoQ8CG65 4998 aa4.57□□□□□ -1.68
Cux1-206ENSMUST00000176172 Krtap4-16Q91W93 202 aa4.43□□□□□ -1.7
Cux1-206ENSMUST00000176172 Mt1P02802 61 aaKnown RBP4.42□□□□□ -1.7
Cux1-206ENSMUST00000176172 Lce1a1Q9CQH5 143 aa4.4□□□□□ -1.7
Cux1-206ENSMUST00000176172 Krtap6-3A0A087WQL6 57 aa4.39□□□□□ -1.71
Cux1-206ENSMUST00000176172 Macf1Q9QXZ0 7354 aaKnown RBP4.32□□□□□ -1.72
Cux1-206ENSMUST00000176172 Gm11554B1AQB2 190 aa4.26□□□□□ -1.73
Cux1-206ENSMUST00000176172 Krtap20-2E9Q0A8 60 aa4.18□□□□□ -1.74
Cux1-206ENSMUST00000176172 DstQ91ZU6 7393 aaKnown RBP4.16□□□□□ -1.74
Cux1-206ENSMUST00000176172 Sprr2bO70554 98 aa4.07□□□□□ -1.76
Cux1-206ENSMUST00000176172 Kmt2dQ6PDK2 5588 aa4.04□□□□□ -1.76
Cux1-206ENSMUST00000176172 Eppk1Q8R0W0 6548 aa4.02□□□□□ -1.77
Cux1-206ENSMUST00000176172 NebE9Q1W3 7152 aa3.94□□□□□ -1.78
Cux1-206ENSMUST00000176172 Gm11555B1AQ89 175 aa3.84□□□□□ -1.79
Cux1-206ENSMUST00000176172 Muc19Q6PZE0 7524 aa3.73□□□□□ -1.81
Cux1-206ENSMUST00000176172 Krtap31-2Q8CAY5 177 aa3.7□□□□□ -1.82
Cux1-206ENSMUST00000176172 1110025L11RikO09048 78 aa3.59□□□□□ -1.84
Cux1-206ENSMUST00000176172 Krtap6-5Q925H3 78 aa3.59□□□□□ -1.84
Cux1-206ENSMUST00000176172 Gpr98Q8VHN7 6298 aaKnown RBP3.43□□□□□ -1.86
Cux1-206ENSMUST00000176172 Gm11639A0A1D5RLM8 5808 aa3.42□□□□□ -1.86
Cux1-206ENSMUST00000176172 Gm10229O08631 77 aa3.37□□□□□ -1.87
Cux1-206ENSMUST00000176172 Gm11559Q9D3H7 191 aa3.35□□□□□ -1.87
Cux1-206ENSMUST00000176172 Gm11568A2A4M2 211 aa3.34□□□□□ -1.87
Cux1-206ENSMUST00000176172 Krtap9-1Q64526 186 aa3.34□□□□□ -1.87
Cux1-206ENSMUST00000176172 Hmcn1D3YXG0 5634 aa3.12□□□□□ -1.91
Cux1-206ENSMUST00000176172 Phgr1Q8K0G7 91 aa3.11□□□□□ -1.91
Cux1-206ENSMUST00000176172 Krtap5-2Q9D5Z7 189 aa3.04□□□□□ -1.92
Cux1-206ENSMUST00000176172 Gm4553A0A1B0GSA9 284 aa2.88□□□□□ -1.95
Cux1-206ENSMUST00000176172 A0A1Y7VJH8 109 aa2.84□□□□□ -1.95
Cux1-206ENSMUST00000176172 A0A1Y7VLE6 161 aa2.75□□□□□ -1.97
Cux1-206ENSMUST00000176172 Krtap6-2O08884 159 aa2.74□□□□□ -1.97
Cux1-206ENSMUST00000176172 AhnakE9Q616 5656 aaKnown RBP2.72□□□□□ -1.97
Cux1-206ENSMUST00000176172 Gm2431E9Q8S1 172 aa2.65□□□□□ -1.98
Cux1-206ENSMUST00000176172 A030003K21RikA0A1Y7VIM3 128 aa2.62□□□□□ -1.99
Cux1-206ENSMUST00000176172 Gm10153A0A1B0GRL1 320 aa2.6□□□□□ -1.99
Cux1-206ENSMUST00000176172 A030005L19RikA0A1Y7VIU2 113 aa2.6□□□□□ -1.99
Cux1-206ENSMUST00000176172 Krtap21-1Q925H4 128 aa2.55□□□□□ -2
Cux1-206ENSMUST00000176172 Gm45337A0A1B0GS71 263 aa2.48□□□□□ -2.01
Cux1-206ENSMUST00000176172 Gm40460A0A1B0GR10 244 aa2.47□□□□□ -2.01
Cux1-206ENSMUST00000176172 Gm7579A0A1B0GRJ4 243 aa2.47□□□□□ -2.01
Cux1-206ENSMUST00000176172 Krtap5-5Q2TA51 241 aa2.47□□□□□ -2.01
Cux1-206ENSMUST00000176172 Krtap5-4Q62220 223 aa2.47□□□□□ -2.01
Cux1-206ENSMUST00000176172 Gm6217A0A1Y7VJK9 128 aa2.45□□□□□ -2.02
Cux1-206ENSMUST00000176172 Gm39115A0A1B0GSH7 232 aa2.26□□□□□ -2.05
Cux1-206ENSMUST00000176172 A0A1Y7VJ07 166 aa2.24□□□□□ -2.05
Cux1-206ENSMUST00000176172 Gm11567Q9D141 195 aa2.2□□□□□ -2.06
Cux1-206ENSMUST00000176172 Krtap28-10A0A1Y7VP58 119 aa2.16□□□□□ -2.06
Cux1-206ENSMUST00000176172 A030005K14RikA0A1Y7VNY1 122 aa2.13□□□□□ -2.07
Cux1-206ENSMUST00000176172 Krtap28-13A0A087WQP5 138 aa1.97□□□□□ -2.09
Cux1-206ENSMUST00000176172 Gm7544A0A1Y7VJ58 118 aa1.97□□□□□ -2.09
Cux1-206ENSMUST00000176172 Gm45618A0A1B0GSA0 219 aa1.96□□□□□ -2.1
Cux1-206ENSMUST00000176172 Gm29735A0A1B0GT06 219 aa1.87□□□□□ -2.11
Cux1-206ENSMUST00000176172 A030014E15RikA0A1Y7VJV2 120 aa1.8□□□□□ -2.12
Cux1-206ENSMUST00000176172 A0A286YCP9 139 aa1.77□□□□□ -2.13
Cux1-206ENSMUST00000176172 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Cux1-206ENSMUST00000176172 Gm4559A4IF42 199 aa1.03□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 7.2 ms