RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Gm6358A0A087WPH4 74 aa2.25□□□□□ -2.05
Lig4-202ENSMUST00000170033 Sprr2dO70555 85 aa2.25□□□□□ -2.05
Lig4-202ENSMUST00000170033 Muc5bE9Q5I3 4800 aa2.24□□□□□ -2.05
Lig4-202ENSMUST00000170033 Lce1lQ9D1G7 135 aa2.22□□□□□ -2.05
Lig4-202ENSMUST00000170033 Gm11569B1AQB1 180 aa2.21□□□□□ -2.06
Lig4-202ENSMUST00000170033 Syne2Q6ZWQ0 6874 aaKnown RBP2.17□□□□□ -2.06
Lig4-202ENSMUST00000170033 Krtap22-2J3QNX6 67 aa2.16□□□□□ -2.06
Lig4-202ENSMUST00000170033 Gm11938Q9D3H4 131 aa2.16□□□□□ -2.06
Lig4-202ENSMUST00000170033 Gm10024A0A0A0MQA4 119 aa2.15□□□□□ -2.07
Lig4-202ENSMUST00000170033 Gm11596B1AQB0 205 aa2.13□□□□□ -2.07
Lig4-202ENSMUST00000170033 Krtap19-4Q925H7 84 aa2.11□□□□□ -2.07
Lig4-202ENSMUST00000170033 Syne1Q6ZWR6 8799 aa2.11□□□□□ -2.07
Lig4-202ENSMUST00000170033 Lce1cQ9D1C5 147 aa2.1□□□□□ -2.07
Lig4-202ENSMUST00000170033 Krtap4-6Q3V4B7 195 aa2.05□□□□□ -2.08
Lig4-202ENSMUST00000170033 Lce1fB9EJP6 147 aa2.04□□□□□ -2.08
Lig4-202ENSMUST00000170033 Lce1a1Q9CQH5 143 aa2.04□□□□□ -2.08
Lig4-202ENSMUST00000170033 Krtap4-16Q91W93 202 aa2.04□□□□□ -2.08
Lig4-202ENSMUST00000170033 Sprr2iO70560 76 aa2.04□□□□□ -2.08
Lig4-202ENSMUST00000170033 Gm11568A2A4M2 211 aa2.01□□□□□ -2.09
Lig4-202ENSMUST00000170033 Sprr2kO70562 68 aa2□□□□□ -2.09
Lig4-202ENSMUST00000170033 Gm11564A2A4L9 201 aa1.97□□□□□ -2.09
Lig4-202ENSMUST00000170033 Gm11595B1AQA7 289 aa1.97□□□□□ -2.09
Lig4-202ENSMUST00000170033 Krtap4-8B1AQA8 209 aa1.97□□□□□ -2.09
Lig4-202ENSMUST00000170033 Mdn1A2ANY6 5589 aaKnown RBP1.96□□□□□ -2.1
Lig4-202ENSMUST00000170033 Krtap9-1Q64526 186 aa1.94□□□□□ -2.1
Lig4-202ENSMUST00000170033 Sprr2eO70556 76 aa1.93□□□□□ -2.1
Lig4-202ENSMUST00000170033 Gm10100J3QK64 120 aa1.93□□□□□ -2.1
Lig4-202ENSMUST00000170033 Lce3bQ9CQM7 98 aa1.93□□□□□ -2.1
Lig4-202ENSMUST00000170033 Gm10142J3KMP7 120 aa1.92□□□□□ -2.1
Lig4-202ENSMUST00000170033 ObscnA2AAJ9 8891 aaKnown RBP1.91□□□□□ -2.1
Lig4-202ENSMUST00000170033 Gm45618A0A1B0GSA0 219 aa1.91□□□□□ -2.1
Lig4-202ENSMUST00000170033 Sprr2hO70559 108 aa1.91□□□□□ -2.1
Lig4-202ENSMUST00000170033 Krtap4-9B1AQA9 244 aa1.91□□□□□ -2.1
Lig4-202ENSMUST00000170033 Sprr2fO70557 76 aa1.91□□□□□ -2.1
Lig4-202ENSMUST00000170033 Muc16A0A140LJ72 8478 aa1.9□□□□□ -2.11
Lig4-202ENSMUST00000170033 Krtap6-3A0A087WQL6 57 aa1.87□□□□□ -2.11
Lig4-202ENSMUST00000170033 Fsip2A2ARZ3 6995 aa1.85□□□□□ -2.11
Lig4-202ENSMUST00000170033 Mt4P47945 62 aa1.85□□□□□ -2.11
Lig4-202ENSMUST00000170033 Krtap4-13Q9D7P3 165 aa1.84□□□□□ -2.11
Lig4-202ENSMUST00000170033 Lce3dE9Q8V1 98 aa1.83□□□□□ -2.12
Lig4-202ENSMUST00000170033 Lce3cQ91V05 98 aa1.83□□□□□ -2.12
Lig4-202ENSMUST00000170033 Lce3eF8VQJ0 98 aa1.81□□□□□ -2.12
Lig4-202ENSMUST00000170033 Lce3fQ6PAI4 98 aa1.81□□□□□ -2.12
Lig4-202ENSMUST00000170033 Gm39115A0A1B0GSH7 232 aa1.79□□□□□ -2.12
Lig4-202ENSMUST00000170033 Lce3aQ497I5 98 aa1.77□□□□□ -2.13
Lig4-202ENSMUST00000170033 Mt1P02802 61 aaKnown RBP1.77□□□□□ -2.13
Lig4-202ENSMUST00000170033 Gm11554B1AQB2 190 aa1.73□□□□□ -2.13
Lig4-202ENSMUST00000170033 Krtap20-2E9Q0A8 60 aa1.72□□□□□ -2.13
Lig4-202ENSMUST00000170033 Gm29735A0A1B0GT06 219 aa1.69□□□□□ -2.14
Lig4-202ENSMUST00000170033 Krtap5-2Q9D5Z7 189 aa1.69□□□□□ -2.14
Lig4-202ENSMUST00000170033 Gm2431E9Q8S1 172 aa1.66□□□□□ -2.14
Lig4-202ENSMUST00000170033 Eppk1Q8R0W0 6548 aa1.64□□□□□ -2.15
Lig4-202ENSMUST00000170033 Gm11567Q9D141 195 aa1.64□□□□□ -2.15
Lig4-202ENSMUST00000170033 Gm10153A0A1B0GRL1 320 aa1.63□□□□□ -2.15
Lig4-202ENSMUST00000170033 Lce1kJ3QP15 125 aa1.63□□□□□ -2.15
Lig4-202ENSMUST00000170033 Mt3P28184 68 aa1.59□□□□□ -2.16
Lig4-202ENSMUST00000170033 Gm11639A0A1D5RLM8 5808 aa1.58□□□□□ -2.16
Lig4-202ENSMUST00000170033 Gm45337A0A1B0GS71 263 aa1.57□□□□□ -2.16
Lig4-202ENSMUST00000170033 Gm40460A0A1B0GR10 244 aa1.56□□□□□ -2.16
Lig4-202ENSMUST00000170033 Gm7579A0A1B0GRJ4 243 aa1.56□□□□□ -2.16
Lig4-202ENSMUST00000170033 Krtap5-5Q2TA51 241 aa1.56□□□□□ -2.16
Lig4-202ENSMUST00000170033 Krtap5-4Q62220 223 aa1.56□□□□□ -2.16
Lig4-202ENSMUST00000170033 Gm4553A0A1B0GSA9 284 aa1.55□□□□□ -2.16
Lig4-202ENSMUST00000170033 Hmcn1D3YXG0 5634 aa1.54□□□□□ -2.16
Lig4-202ENSMUST00000170033 Kmt2dQ6PDK2 5588 aa1.5□□□□□ -2.17
Lig4-202ENSMUST00000170033 Gpr98Q8VHN7 6298 aaKnown RBP1.5□□□□□ -2.17
Lig4-202ENSMUST00000170033 Macf1Q9QXZ0 7354 aaKnown RBP1.49□□□□□ -2.17
Lig4-202ENSMUST00000170033 Muc19Q6PZE0 7524 aa1.48□□□□□ -2.17
Lig4-202ENSMUST00000170033 Sprr2bO70554 98 aa1.44□□□□□ -2.18
Lig4-202ENSMUST00000170033 1110025L11RikO09048 78 aa1.39□□□□□ -2.19
Lig4-202ENSMUST00000170033 Krtap6-5Q925H3 78 aa1.39□□□□□ -2.19
Lig4-202ENSMUST00000170033 DstQ91ZU6 7393 aaKnown RBP1.32□□□□□ -2.2
Lig4-202ENSMUST00000170033 NebE9Q1W3 7152 aa1.32□□□□□ -2.2
Lig4-202ENSMUST00000170033 Krtap5-1Q64507 230 aa1.29□□□□□ -2.2
Lig4-202ENSMUST00000170033 AhnakE9Q616 5656 aaKnown RBP1.26□□□□□ -2.21
Lig4-202ENSMUST00000170033 Gm4559A4IF42 199 aa1.26□□□□□ -2.21
Lig4-202ENSMUST00000170033 Gm10229O08631 77 aa1.22□□□□□ -2.21
Lig4-202ENSMUST00000170033 Krtap21-1Q925H4 128 aa1.15□□□□□ -2.23
Lig4-202ENSMUST00000170033 Phgr1Q8K0G7 91 aa1.13□□□□□ -2.23
Lig4-202ENSMUST00000170033 Krtap6-2O08884 159 aa1.02□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 88.4 ms