RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 Krtap19-9bQ99NG9 58 aa6.26□□□□□ -1.41
Tpm1-215ENSMUST00000113705 Gm12216A0A1W2P827 62 aa6.23□□□□□ -1.41
Tpm1-215ENSMUST00000113705 Romo1P60603 79 aa6.19□□□□□ -1.42
Tpm1-215ENSMUST00000113705 A030003K21RikA0A1Y7VIM3 128 aa6.14□□□□□ -1.43
Tpm1-215ENSMUST00000113705 Sprr2gO70558 76 aa6.1□□□□□ -1.43
Tpm1-215ENSMUST00000113705 Lce1a1Q9CQH5 143 aa6.05□□□□□ -1.44
Tpm1-215ENSMUST00000113705 Krtap20-2E9Q0A8 60 aa5.95□□□□□ -1.46
Tpm1-215ENSMUST00000113705 Lce1dQ9D731 133 aa5.9□□□□□ -1.47
Tpm1-215ENSMUST00000113705 Gm20538F6Z9R1 75 aa5.87□□□□□ -1.47
Tpm1-215ENSMUST00000113705 2310046K23RikA0A0A6YVW6 87 aa5.86□□□□□ -1.47
Tpm1-215ENSMUST00000113705 Gm6217A0A1Y7VJK9 128 aa5.83□□□□□ -1.48
Tpm1-215ENSMUST00000113705 Krtap7-1Q9D3I6 87 aa5.72□□□□□ -1.49
Tpm1-215ENSMUST00000113705 Sprr2iO70560 76 aa5.71□□□□□ -1.5
Tpm1-215ENSMUST00000113705 Lce1kJ3QP15 125 aa5.7□□□□□ -1.5
Tpm1-215ENSMUST00000113705 Gm10272F7CZ33 110 aa5.67□□□□□ -1.5
Tpm1-215ENSMUST00000113705 Krtap5-2Q9D5Z7 189 aa5.67□□□□□ -1.5
Tpm1-215ENSMUST00000113705 Lce3bQ9CQM7 98 aa5.63□□□□□ -1.51
Tpm1-215ENSMUST00000113705 Gm40193A0A1B0GT39 78 aa5.62□□□□□ -1.51
Tpm1-215ENSMUST00000113705 A0A286YCP9 139 aa5.62□□□□□ -1.51
Tpm1-215ENSMUST00000113705 Syne1Q6ZWR6 8799 aa5.61□□□□□ -1.51
Tpm1-215ENSMUST00000113705 Mp68P56379 58 aa5.57□□□□□ -1.52
Tpm1-215ENSMUST00000113705 Gm10100J3QK64 120 aa5.53□□□□□ -1.52
Tpm1-215ENSMUST00000113705 Gm11568A2A4M2 211 aa5.5□□□□□ -1.53
Tpm1-215ENSMUST00000113705 Krtap9-1Q64526 186 aa5.5□□□□□ -1.53
Tpm1-215ENSMUST00000113705 Macf1Q9QXZ0 7354 aaKnown RBP5.5□□□□□ -1.53
Tpm1-215ENSMUST00000113705 Gm11554B1AQB2 190 aa5.49□□□□□ -1.53
Tpm1-215ENSMUST00000113705 Eppk1Q8R0W0 6548 aa5.46□□□□□ -1.54
Tpm1-215ENSMUST00000113705 Tnp1P10856 55 aa5.43□□□□□ -1.54
Tpm1-215ENSMUST00000113705 Gm4553A0A1B0GSA9 284 aa5.39□□□□□ -1.55
Tpm1-215ENSMUST00000113705 Lce1fB9EJP6 147 aa5.38□□□□□ -1.55
Tpm1-215ENSMUST00000113705 Lce1cQ9D1C5 147 aa5.38□□□□□ -1.55
Tpm1-215ENSMUST00000113705 Kmt2dQ6PDK2 5588 aa5.32□□□□□ -1.56
Tpm1-215ENSMUST00000113705 Gm2431E9Q8S1 172 aa5.24□□□□□ -1.57
Tpm1-215ENSMUST00000113705 Gm11938Q9D3H4 131 aa5.18□□□□□ -1.58
Tpm1-215ENSMUST00000113705 Gm11639A0A1D5RLM8 5808 aa5.16□□□□□ -1.58
Tpm1-215ENSMUST00000113705 Gm45337A0A1B0GS71 263 aa5.16□□□□□ -1.58
Tpm1-215ENSMUST00000113705 Mt1P02802 61 aaKnown RBP5.16□□□□□ -1.58
Tpm1-215ENSMUST00000113705 Hmcn1D3YXG0 5634 aa5.12□□□□□ -1.59
Tpm1-215ENSMUST00000113705 Gm10153A0A1B0GRL1 320 aa5.1□□□□□ -1.59
Tpm1-215ENSMUST00000113705 Krtap19-4Q925H7 84 aa5.1□□□□□ -1.59
Tpm1-215ENSMUST00000113705 Muc19Q6PZE0 7524 aa5.09□□□□□ -1.59
Tpm1-215ENSMUST00000113705 Lce3cQ91V05 98 aa5.07□□□□□ -1.6
Tpm1-215ENSMUST00000113705 Gm10142J3KMP7 120 aa5.04□□□□□ -1.6
Tpm1-215ENSMUST00000113705 Lce3dE9Q8V1 98 aa4.98□□□□□ -1.61
Tpm1-215ENSMUST00000113705 Gm40460A0A1B0GR10 244 aa4.97□□□□□ -1.61
Tpm1-215ENSMUST00000113705 Gm7579A0A1B0GRJ4 243 aa4.97□□□□□ -1.61
Tpm1-215ENSMUST00000113705 Krtap5-5Q2TA51 241 aa4.97□□□□□ -1.61
Tpm1-215ENSMUST00000113705 Krtap5-4Q62220 223 aa4.97□□□□□ -1.61
Tpm1-215ENSMUST00000113705 Gm9112A2AI92 75 aa4.93□□□□□ -1.62
Tpm1-215ENSMUST00000113705 Gm39115A0A1B0GSH7 232 aa4.88□□□□□ -1.63
Tpm1-215ENSMUST00000113705 Gpr98Q8VHN7 6298 aaKnown RBP4.86□□□□□ -1.63
Tpm1-215ENSMUST00000113705 DstQ91ZU6 7393 aaKnown RBP4.86□□□□□ -1.63
Tpm1-215ENSMUST00000113705 Lce3eF8VQJ0 98 aa4.86□□□□□ -1.63
Tpm1-215ENSMUST00000113705 Lce3fQ6PAI4 98 aa4.86□□□□□ -1.63
Tpm1-215ENSMUST00000113705 Ndufaf8A2AMZ4 74 aa4.8□□□□□ -1.64
Tpm1-215ENSMUST00000113705 Mt3P28184 68 aa4.75□□□□□ -1.65
Tpm1-215ENSMUST00000113705 ObscnA2AAJ9 8891 aaKnown RBP4.73□□□□□ -1.65
Tpm1-215ENSMUST00000113705 4933428G20RikQ9D3X4 101 aa4.7□□□□□ -1.66
Tpm1-215ENSMUST00000113705 NebE9Q1W3 7152 aa4.69□□□□□ -1.66
Tpm1-215ENSMUST00000113705 Sprr2dO70555 85 aa4.65□□□□□ -1.66
Tpm1-215ENSMUST00000113705 Lce3aQ497I5 98 aa4.64□□□□□ -1.67
Tpm1-215ENSMUST00000113705 Sprr2fO70557 76 aa4.62□□□□□ -1.67
Tpm1-215ENSMUST00000113705 Krtap4-16Q91W93 202 aa4.6□□□□□ -1.67
Tpm1-215ENSMUST00000113705 Gm45618A0A1B0GSA0 219 aa4.56□□□□□ -1.68
Tpm1-215ENSMUST00000113705 AhnakE9Q616 5656 aaKnown RBP4.5□□□□□ -1.69
Tpm1-215ENSMUST00000113705 Sprr2eO70556 76 aa4.24□□□□□ -1.73
Tpm1-215ENSMUST00000113705 Gm29735A0A1B0GT06 219 aa4.12□□□□□ -1.75
Tpm1-215ENSMUST00000113705 Gm10024A0A0A0MQA4 119 aa4.05□□□□□ -1.76
Tpm1-215ENSMUST00000113705 Gm11567Q9D141 195 aa4.05□□□□□ -1.76
Tpm1-215ENSMUST00000113705 Sprr2hO70559 108 aa4.03□□□□□ -1.76
Tpm1-215ENSMUST00000113705 Muc16A0A140LJ72 8478 aa3.81□□□□□ -1.8
Tpm1-215ENSMUST00000113705 1110025L11RikO09048 78 aa3.71□□□□□ -1.82
Tpm1-215ENSMUST00000113705 Krtap6-5Q925H3 78 aa3.71□□□□□ -1.82
Tpm1-215ENSMUST00000113705 Gm10229O08631 77 aa3.33□□□□□ -1.88
Tpm1-215ENSMUST00000113705 Krtap5-1Q64507 230 aa3□□□□□ -1.93
Tpm1-215ENSMUST00000113705 Krtap21-1Q925H4 128 aa2.99□□□□□ -1.93
Tpm1-215ENSMUST00000113705 Gm4559A4IF42 199 aa2.97□□□□□ -1.93
Tpm1-215ENSMUST00000113705 Krtap6-2O08884 159 aa2.96□□□□□ -1.94
Tpm1-215ENSMUST00000113705 Sprr2bO70554 98 aa2.96□□□□□ -1.94
Tpm1-215ENSMUST00000113705 Phgr1Q8K0G7 91 aa2.42□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 73 ms