RNA–Protein interactions for RNA: ENSMUST00000113693.7

Tpm1-210, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,054 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-210ENSMUST00000113693 Sprr2iO70560 76 aa4.68□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Sprr2a3Q4KL71 83 aa4.68□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Sprr2a1Q9CQK8 83 aa4.68□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Krtap5-2Q9D5Z7 189 aa4.68□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Muc19Q6PZE0 7524 aa4.67□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Lce1kJ3QP15 125 aa4.67□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Kmt2dQ6PDK2 5588 aa4.67□□□□□ -1.66
Tpm1-210ENSMUST00000113693 Mp68P56379 58 aa4.65□□□□□ -1.67
Tpm1-210ENSMUST00000113693 Gm40193A0A1B0GT39 78 aa4.63□□□□□ -1.67
Tpm1-210ENSMUST00000113693 Gm20538F6Z9R1 75 aa4.62□□□□□ -1.67
Tpm1-210ENSMUST00000113693 Krtap7-1Q9D3I6 87 aa4.55□□□□□ -1.68
Tpm1-210ENSMUST00000113693 Gm4553A0A1B0GSA9 284 aa4.54□□□□□ -1.68
Tpm1-210ENSMUST00000113693 Gm11568A2A4M2 211 aa4.48□□□□□ -1.69
Tpm1-210ENSMUST00000113693 Krtap9-1Q64526 186 aa4.48□□□□□ -1.69
Tpm1-210ENSMUST00000113693 Gm2431E9Q8S1 172 aa4.47□□□□□ -1.69
Tpm1-210ENSMUST00000113693 Camk2n1Q6QWF9 78 aa4.46□□□□□ -1.7
Tpm1-210ENSMUST00000113693 NebE9Q1W3 7152 aa4.34□□□□□ -1.71
Tpm1-210ENSMUST00000113693 Syne1Q6ZWR6 8799 aa4.31□□□□□ -1.72
Tpm1-210ENSMUST00000113693 DstQ91ZU6 7393 aaKnown RBP4.31□□□□□ -1.72
Tpm1-210ENSMUST00000113693 Lce3bQ9CQM7 98 aa4.3□□□□□ -1.72
Tpm1-210ENSMUST00000113693 Ndufaf8A2AMZ4 74 aa4.29□□□□□ -1.72
Tpm1-210ENSMUST00000113693 Krtap19-9bQ99NG9 58 aa4.27□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Gm45337A0A1B0GS71 263 aa4.25□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Lce1fB9EJP6 147 aa4.25□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Lce1cQ9D1C5 147 aa4.25□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Hmcn1D3YXG0 5634 aa4.24□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Krtap4-16Q91W93 202 aa4.23□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Tnp1P10856 55 aa4.22□□□□□ -1.73
Tpm1-210ENSMUST00000113693 Krtap19-4Q925H7 84 aa4.16□□□□□ -1.74
Tpm1-210ENSMUST00000113693 Gm39115A0A1B0GSH7 232 aa4.14□□□□□ -1.75
Tpm1-210ENSMUST00000113693 Sprr2fO70557 76 aa4.1□□□□□ -1.75
Tpm1-210ENSMUST00000113693 Gm40460A0A1B0GR10 244 aa4.07□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Gm7579A0A1B0GRJ4 243 aa4.07□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Gm10272F7CZ33 110 aa4.07□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Krtap5-5Q2TA51 241 aa4.07□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Krtap5-4Q62220 223 aa4.07□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Gm10153A0A1B0GRL1 320 aa4.04□□□□□ -1.76
Tpm1-210ENSMUST00000113693 Gm45618A0A1B0GSA0 219 aa3.97□□□□□ -1.77
Tpm1-210ENSMUST00000113693 Gm11938Q9D3H4 131 aa3.92□□□□□ -1.78
Tpm1-210ENSMUST00000113693 AhnakE9Q616 5656 aaKnown RBP3.9□□□□□ -1.79
Tpm1-210ENSMUST00000113693 Mt1P02802 61 aaKnown RBP3.9□□□□□ -1.79
Tpm1-210ENSMUST00000113693 Gm9112A2AI92 75 aa3.84□□□□□ -1.79
Tpm1-210ENSMUST00000113693 Lce3cQ91V05 98 aa3.7□□□□□ -1.82
Tpm1-210ENSMUST00000113693 Mt3P28184 68 aa3.69□□□□□ -1.82
Tpm1-210ENSMUST00000113693 Lce3dE9Q8V1 98 aa3.61□□□□□ -1.83
Tpm1-210ENSMUST00000113693 4933428G20RikQ9D3X4 101 aa3.55□□□□□ -1.84
Tpm1-210ENSMUST00000113693 Sprr2dO70555 85 aa3.52□□□□□ -1.85
Tpm1-210ENSMUST00000113693 Krtap28-13A0A087WQP5 138 aa3.47□□□□□ -1.85
Tpm1-210ENSMUST00000113693 A0A1Y7VLE6 161 aa3.47□□□□□ -1.85
Tpm1-210ENSMUST00000113693 A030005K14RikA0A1Y7VNY1 122 aa3.44□□□□□ -1.86
Tpm1-210ENSMUST00000113693 Lce3eF8VQJ0 98 aa3.42□□□□□ -1.86
Tpm1-210ENSMUST00000113693 Lce3fQ6PAI4 98 aa3.42□□□□□ -1.86
Tpm1-210ENSMUST00000113693 Gm10100J3QK64 120 aa3.41□□□□□ -1.86
Tpm1-210ENSMUST00000113693 Krtap28-10A0A1Y7VP58 119 aa3.4□□□□□ -1.87
Tpm1-210ENSMUST00000113693 ObscnA2AAJ9 8891 aaKnown RBP3.38□□□□□ -1.87
Tpm1-210ENSMUST00000113693 Sprr2eO70556 76 aa3.31□□□□□ -1.88
Tpm1-210ENSMUST00000113693 Sprr2hO70559 108 aa3.3□□□□□ -1.88
Tpm1-210ENSMUST00000113693 Krtap31-2Q8CAY5 177 aa3.29□□□□□ -1.88
Tpm1-210ENSMUST00000113693 Lce3aQ497I5 98 aa3.27□□□□□ -1.89
Tpm1-210ENSMUST00000113693 A0A1Y7VJ07 166 aa3.18□□□□□ -1.9
Tpm1-210ENSMUST00000113693 A030014E15RikA0A1Y7VJV2 120 aa3.17□□□□□ -1.9
Tpm1-210ENSMUST00000113693 Gm10142J3KMP7 120 aa3.13□□□□□ -1.91
Tpm1-210ENSMUST00000113693 Muc16A0A140LJ72 8478 aa3.1□□□□□ -1.91
Tpm1-210ENSMUST00000113693 Gm7544A0A1Y7VJ58 118 aa3.07□□□□□ -1.92
Tpm1-210ENSMUST00000113693 Gm10024A0A0A0MQA4 119 aa3.03□□□□□ -1.92
Tpm1-210ENSMUST00000113693 Krtap31-1Q9D644 177 aa2.99□□□□□ -1.93
Tpm1-210ENSMUST00000113693 Gm29735A0A1B0GT06 219 aa2.93□□□□□ -1.94
Tpm1-210ENSMUST00000113693 Gm11567Q9D141 195 aa2.86□□□□□ -1.95
Tpm1-210ENSMUST00000113693 A030003K21RikA0A1Y7VIM3 128 aa2.76□□□□□ -1.97
Tpm1-210ENSMUST00000113693 1110025L11RikO09048 78 aa2.67□□□□□ -1.98
Tpm1-210ENSMUST00000113693 Krtap6-5Q925H3 78 aa2.67□□□□□ -1.98
Tpm1-210ENSMUST00000113693 Krtap5-1Q64507 230 aa2.6□□□□□ -1.99
Tpm1-210ENSMUST00000113693 A0A286YCP9 139 aa2.57□□□□□ -2
Tpm1-210ENSMUST00000113693 Sprr2bO70554 98 aa2.57□□□□□ -2
Tpm1-210ENSMUST00000113693 Gm10229O08631 77 aa2.43□□□□□ -2.02
Tpm1-210ENSMUST00000113693 Gm6217A0A1Y7VJK9 128 aa2.35□□□□□ -2.03
Tpm1-210ENSMUST00000113693 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Tpm1-210ENSMUST00000113693 Krtap21-1Q925H4 128 aa2.11□□□□□ -2.07
Tpm1-210ENSMUST00000113693 Phgr1Q8K0G7 91 aa1.79□□□□□ -2.12
Tpm1-210ENSMUST00000113693 Gm4559A4IF42 199 aa1.75□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 169.7 ms