RNA–Protein interactions for RNA: ENSMUST00000112451.7

Sh3kbp1-204, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-204ENSMUST00000112451 Gm11564A2A4L9 201 aa3.22□□□□□ -1.89
Sh3kbp1-204ENSMUST00000112451 Gm11563B1AQ90 168 aa3.22□□□□□ -1.89
Sh3kbp1-204ENSMUST00000112451 Gm11595B1AQA7 289 aa3.22□□□□□ -1.89
Sh3kbp1-204ENSMUST00000112451 Krtap4-8B1AQA8 209 aa3.22□□□□□ -1.89
Sh3kbp1-204ENSMUST00000112451 Mdn1A2ANY6 5589 aaKnown RBP3.21□□□□□ -1.9
Sh3kbp1-204ENSMUST00000112451 Krtap4-7Q9D732 168 aa3.2□□□□□ -1.9
Sh3kbp1-204ENSMUST00000112451 Lce3bQ9CQM7 98 aa3.19□□□□□ -1.9
Sh3kbp1-204ENSMUST00000112451 Mt4P47945 62 aa3.13□□□□□ -1.91
Sh3kbp1-204ENSMUST00000112451 Krtap4-9B1AQA9 244 aa3.12□□□□□ -1.91
Sh3kbp1-204ENSMUST00000112451 Lce1cQ9D1C5 147 aa3.11□□□□□ -1.91
Sh3kbp1-204ENSMUST00000112451 Syne2Q6ZWQ0 6874 aaKnown RBP3.08□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 Gm10100J3QK64 120 aa3.07□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 Gm38119A0A0A6YX29 146 aa3.06□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 2300003K06RikA2A4M0 262 aa3.05□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 Gm6217A0A1Y7VJK9 128 aa3.04□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 Gm10142J3KMP7 120 aa3.03□□□□□ -1.92
Sh3kbp1-204ENSMUST00000112451 Lce3dE9Q8V1 98 aa3.02□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Lce3cQ91V05 98 aa3.02□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 A0A286YCP9 139 aa3.01□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Syne1Q6ZWR6 8799 aa3□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Lce3eF8VQJ0 98 aa3□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Lce3fQ6PAI4 98 aa3□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Sprr2hO70559 108 aa2.99□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Sprr2kO70562 68 aa2.99□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Lce1fB9EJP6 147 aa2.99□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Lce1a1Q9CQH5 143 aa2.99□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Sprr2iO70560 76 aa2.98□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Mt1P02802 61 aaKnown RBP2.98□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Krtap4-13Q9D7P3 165 aa2.98□□□□□ -1.93
Sh3kbp1-204ENSMUST00000112451 Sprr2eO70556 76 aa2.94□□□□□ -1.94
Sh3kbp1-204ENSMUST00000112451 Krtap5-2Q9D5Z7 189 aa2.94□□□□□ -1.94
Sh3kbp1-204ENSMUST00000112451 Krtap6-3A0A087WQL6 57 aa2.93□□□□□ -1.94
Sh3kbp1-204ENSMUST00000112451 Lce1kJ3QP15 125 aa2.91□□□□□ -1.94
Sh3kbp1-204ENSMUST00000112451 Lce1lQ9D1G7 135 aa2.9□□□□□ -1.94
Sh3kbp1-204ENSMUST00000112451 Lce3aQ497I5 98 aa2.88□□□□□ -1.95
Sh3kbp1-204ENSMUST00000112451 Gm11568A2A4M2 211 aa2.86□□□□□ -1.95
Sh3kbp1-204ENSMUST00000112451 Krtap9-1Q64526 186 aa2.86□□□□□ -1.95
Sh3kbp1-204ENSMUST00000112451 ObscnA2AAJ9 8891 aaKnown RBP2.82□□□□□ -1.96
Sh3kbp1-204ENSMUST00000112451 Krtap20-2E9Q0A8 60 aa2.79□□□□□ -1.96
Sh3kbp1-204ENSMUST00000112451 Gm10153A0A1B0GRL1 320 aa2.78□□□□□ -1.96
Sh3kbp1-204ENSMUST00000112451 Sprr2fO70557 76 aa2.77□□□□□ -1.97
Sh3kbp1-204ENSMUST00000112451 Fsip2A2ARZ3 6995 aa2.73□□□□□ -1.97
Sh3kbp1-204ENSMUST00000112451 Gm45337A0A1B0GS71 263 aa2.72□□□□□ -1.97
Sh3kbp1-204ENSMUST00000112451 Gm4553A0A1B0GSA9 284 aa2.71□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Mt3P28184 68 aa2.69□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Gm40460A0A1B0GR10 244 aa2.67□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Gm7579A0A1B0GRJ4 243 aa2.67□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Krtap5-5Q2TA51 241 aa2.67□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Krtap5-4Q62220 223 aa2.67□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Krtap31-2Q8CAY5 177 aa2.66□□□□□ -1.98
Sh3kbp1-204ENSMUST00000112451 Gm11559Q9D3H7 191 aa2.63□□□□□ -1.99
Sh3kbp1-204ENSMUST00000112451 Krtap31-1Q9D644 177 aa2.63□□□□□ -1.99
Sh3kbp1-204ENSMUST00000112451 Gm2431E9Q8S1 172 aa2.57□□□□□ -2
Sh3kbp1-204ENSMUST00000112451 Gm10024A0A0A0MQA4 119 aa2.53□□□□□ -2
Sh3kbp1-204ENSMUST00000112451 Gm39115A0A1B0GSH7 232 aa2.46□□□□□ -2.02
Sh3kbp1-204ENSMUST00000112451 Kmt2dQ6PDK2 5588 aa2.39□□□□□ -2.03
Sh3kbp1-204ENSMUST00000112451 Gm11554B1AQB2 190 aa2.37□□□□□ -2.03
Sh3kbp1-204ENSMUST00000112451 Krtap4-16Q91W93 202 aa2.33□□□□□ -2.04
Sh3kbp1-204ENSMUST00000112451 Hmcn1D3YXG0 5634 aa2.33□□□□□ -2.04
Sh3kbp1-204ENSMUST00000112451 1110025L11RikO09048 78 aa2.29□□□□□ -2.04
Sh3kbp1-204ENSMUST00000112451 Krtap6-5Q925H3 78 aa2.29□□□□□ -2.04
Sh3kbp1-204ENSMUST00000112451 Eppk1Q8R0W0 6548 aa2.23□□□□□ -2.05
Sh3kbp1-204ENSMUST00000112451 Sprr2bO70554 98 aa2.2□□□□□ -2.06
Sh3kbp1-204ENSMUST00000112451 Macf1Q9QXZ0 7354 aaKnown RBP2.19□□□□□ -2.06
Sh3kbp1-204ENSMUST00000112451 Gm45618A0A1B0GSA0 219 aa2.17□□□□□ -2.06
Sh3kbp1-204ENSMUST00000112451 Muc16A0A140LJ72 8478 aa2.11□□□□□ -2.07
Sh3kbp1-204ENSMUST00000112451 DstQ91ZU6 7393 aaKnown RBP2.09□□□□□ -2.08
Sh3kbp1-204ENSMUST00000112451 AhnakE9Q616 5656 aaKnown RBP2.05□□□□□ -2.08
Sh3kbp1-204ENSMUST00000112451 Gm29735A0A1B0GT06 219 aa2.03□□□□□ -2.08
Sh3kbp1-204ENSMUST00000112451 Gm10229O08631 77 aa2.02□□□□□ -2.09
Sh3kbp1-204ENSMUST00000112451 Gm11567Q9D141 195 aa1.98□□□□□ -2.09
Sh3kbp1-204ENSMUST00000112451 Gm11639A0A1D5RLM8 5808 aa1.97□□□□□ -2.09
Sh3kbp1-204ENSMUST00000112451 Krtap21-1Q925H4 128 aa1.88□□□□□ -2.11
Sh3kbp1-204ENSMUST00000112451 Muc19Q6PZE0 7524 aa1.85□□□□□ -2.11
Sh3kbp1-204ENSMUST00000112451 Gpr98Q8VHN7 6298 aaKnown RBP1.79□□□□□ -2.12
Sh3kbp1-204ENSMUST00000112451 Phgr1Q8K0G7 91 aa1.76□□□□□ -2.13
Sh3kbp1-204ENSMUST00000112451 Krtap6-2O08884 159 aa1.71□□□□□ -2.14
Sh3kbp1-204ENSMUST00000112451 NebE9Q1W3 7152 aa1.7□□□□□ -2.14
Sh3kbp1-204ENSMUST00000112451 Gm4559A4IF42 199 aa1.48□□□□□ -2.17
Sh3kbp1-204ENSMUST00000112451 Krtap5-1Q64507 230 aa1.48□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 370.8 ms