RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Sprr2dO70555 85 aa3.73□□□□□ -1.81
Ssh1-202ENSMUST00000112298 Krtap31-1Q9D644 177 aa3.71□□□□□ -1.82
Ssh1-202ENSMUST00000112298 Lce1a2Q9D1K4 149 aa3.68□□□□□ -1.82
Ssh1-202ENSMUST00000112298 Krtap4-6Q3V4B7 195 aa3.63□□□□□ -1.83
Ssh1-202ENSMUST00000112298 Gm11562A0PK51 136 aa3.62□□□□□ -1.83
Ssh1-202ENSMUST00000112298 Gm11938Q9D3H4 131 aa3.6□□□□□ -1.83
Ssh1-202ENSMUST00000112298 Syne2Q6ZWQ0 6874 aaKnown RBP3.52□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Gm11596B1AQB0 205 aa3.52□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Krtap4-1Q3UUY3 169 aa3.52□□□□□ -1.85
Ssh1-202ENSMUST00000112298 SspoQ8CG65 4998 aa3.5□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Fsip2A2ARZ3 6995 aa3.49□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Muc5bE9Q5I3 4800 aa3.49□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Mt3P28184 68 aa3.48□□□□□ -1.85
Ssh1-202ENSMUST00000112298 Syne1Q6ZWR6 8799 aa3.46□□□□□ -1.86
Ssh1-202ENSMUST00000112298 2300003K06RikA2A4M0 262 aa3.45□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Gm11564A2A4L9 201 aa3.42□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Gm11563B1AQ90 168 aa3.42□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Gm11595B1AQA7 289 aa3.42□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Krtap4-8B1AQA8 209 aa3.42□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Krtap4-7Q9D732 168 aa3.42□□□□□ -1.86
Ssh1-202ENSMUST00000112298 Lce1kJ3QP15 125 aa3.4□□□□□ -1.87
Ssh1-202ENSMUST00000112298 Krtap4-9B1AQA9 244 aa3.38□□□□□ -1.87
Ssh1-202ENSMUST00000112298 Krtap31-2Q8CAY5 177 aa3.36□□□□□ -1.87
Ssh1-202ENSMUST00000112298 Krtap4-16Q91W93 202 aa3.3□□□□□ -1.88
Ssh1-202ENSMUST00000112298 Krtap4-13Q9D7P3 165 aa3.29□□□□□ -1.88
Ssh1-202ENSMUST00000112298 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Ssh1-202ENSMUST00000112298 Gm11555B1AQ89 175 aa3.21□□□□□ -1.9
Ssh1-202ENSMUST00000112298 Sprr2bO70554 98 aa3.15□□□□□ -1.91
Ssh1-202ENSMUST00000112298 Lce1a1Q9CQH5 143 aa3.13□□□□□ -1.91
Ssh1-202ENSMUST00000112298 Krtap6-3A0A087WQL6 57 aa3.11□□□□□ -1.91
Ssh1-202ENSMUST00000112298 ObscnA2AAJ9 8891 aaKnown RBP2.98□□□□□ -1.93
Ssh1-202ENSMUST00000112298 Gm11554B1AQB2 190 aa2.97□□□□□ -1.93
Ssh1-202ENSMUST00000112298 Macf1Q9QXZ0 7354 aaKnown RBP2.94□□□□□ -1.94
Ssh1-202ENSMUST00000112298 Krtap20-2E9Q0A8 60 aa2.88□□□□□ -1.95
Ssh1-202ENSMUST00000112298 Muc16A0A140LJ72 8478 aa2.85□□□□□ -1.95
Ssh1-202ENSMUST00000112298 Eppk1Q8R0W0 6548 aa2.81□□□□□ -1.96
Ssh1-202ENSMUST00000112298 1110025L11RikO09048 78 aa2.63□□□□□ -1.99
Ssh1-202ENSMUST00000112298 Krtap6-5Q925H3 78 aa2.63□□□□□ -1.99
Ssh1-202ENSMUST00000112298 Kmt2dQ6PDK2 5588 aa2.62□□□□□ -1.99
Ssh1-202ENSMUST00000112298 DstQ91ZU6 7393 aaKnown RBP2.61□□□□□ -1.99
Ssh1-202ENSMUST00000112298 NebE9Q1W3 7152 aa2.56□□□□□ -2
Ssh1-202ENSMUST00000112298 Gm11568A2A4M2 211 aa2.52□□□□□ -2.01
Ssh1-202ENSMUST00000112298 Krtap9-1Q64526 186 aa2.52□□□□□ -2.01
Ssh1-202ENSMUST00000112298 Gm10229O08631 77 aa2.5□□□□□ -2.01
Ssh1-202ENSMUST00000112298 Gm11559Q9D3H7 191 aa2.48□□□□□ -2.01
Ssh1-202ENSMUST00000112298 Muc19Q6PZE0 7524 aa2.47□□□□□ -2.01
Ssh1-202ENSMUST00000112298 Krtap5-2Q9D5Z7 189 aa2.4□□□□□ -2.03
Ssh1-202ENSMUST00000112298 Gm11639A0A1D5RLM8 5808 aa2.4□□□□□ -2.03
Ssh1-202ENSMUST00000112298 Hmcn1D3YXG0 5634 aa2.36□□□□□ -2.03
Ssh1-202ENSMUST00000112298 Phgr1Q8K0G7 91 aa2.36□□□□□ -2.03
Ssh1-202ENSMUST00000112298 A0A1Y7VJH8 109 aa2.29□□□□□ -2.04
Ssh1-202ENSMUST00000112298 Gpr98Q8VHN7 6298 aaKnown RBP2.28□□□□□ -2.05
Ssh1-202ENSMUST00000112298 Gm4553A0A1B0GSA9 284 aa2.26□□□□□ -2.05
Ssh1-202ENSMUST00000112298 Gm2431E9Q8S1 172 aa2.23□□□□□ -2.05
Ssh1-202ENSMUST00000112298 A030005L19RikA0A1Y7VIU2 113 aa2.15□□□□□ -2.06
Ssh1-202ENSMUST00000112298 Gm10153A0A1B0GRL1 320 aa2.14□□□□□ -2.07
Ssh1-202ENSMUST00000112298 Gm45337A0A1B0GS71 263 aa2.09□□□□□ -2.07
Ssh1-202ENSMUST00000112298 Gm40460A0A1B0GR10 244 aa2.01□□□□□ -2.09
Ssh1-202ENSMUST00000112298 Gm7579A0A1B0GRJ4 243 aa2.01□□□□□ -2.09
Ssh1-202ENSMUST00000112298 Krtap5-5Q2TA51 241 aa2.01□□□□□ -2.09
Ssh1-202ENSMUST00000112298 Krtap5-4Q62220 223 aa2.01□□□□□ -2.09
Ssh1-202ENSMUST00000112298 AhnakE9Q616 5656 aaKnown RBP2.01□□□□□ -2.09
Ssh1-202ENSMUST00000112298 Krtap6-2O08884 159 aa1.98□□□□□ -2.09
Ssh1-202ENSMUST00000112298 Gm39115A0A1B0GSH7 232 aa1.94□□□□□ -2.1
Ssh1-202ENSMUST00000112298 Krtap21-1Q925H4 128 aa1.83□□□□□ -2.12
Ssh1-202ENSMUST00000112298 Gm11567Q9D141 195 aa1.83□□□□□ -2.12
Ssh1-202ENSMUST00000112298 A0A1Y7VLE6 161 aa1.81□□□□□ -2.12
Ssh1-202ENSMUST00000112298 Gm45618A0A1B0GSA0 219 aa1.72□□□□□ -2.13
Ssh1-202ENSMUST00000112298 Gm29735A0A1B0GT06 219 aa1.48□□□□□ -2.17
Ssh1-202ENSMUST00000112298 A0A1Y7VJ07 166 aa1.34□□□□□ -2.2
Ssh1-202ENSMUST00000112298 A030003K21RikA0A1Y7VIM3 128 aa1.3□□□□□ -2.2
Ssh1-202ENSMUST00000112298 Krtap28-13A0A087WQP5 138 aa1.26□□□□□ -2.21
Ssh1-202ENSMUST00000112298 A030005K14RikA0A1Y7VNY1 122 aa1.25□□□□□ -2.21
Ssh1-202ENSMUST00000112298 Krtap28-10A0A1Y7VP58 119 aa1.25□□□□□ -2.21
Ssh1-202ENSMUST00000112298 Gm6217A0A1Y7VJK9 128 aa1.2□□□□□ -2.22
Ssh1-202ENSMUST00000112298 Krtap5-1Q64507 230 aa1.2□□□□□ -2.22
Ssh1-202ENSMUST00000112298 A030014E15RikA0A1Y7VJV2 120 aa1.12□□□□□ -2.23
Ssh1-202ENSMUST00000112298 Gm7544A0A1Y7VJ58 118 aa1.12□□□□□ -2.23
Ssh1-202ENSMUST00000112298 A0A286YCP9 139 aa1.11□□□□□ -2.23
Ssh1-202ENSMUST00000112298 Gm4559A4IF42 199 aa0.84□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 180.6 ms