RNA–Protein interactions for RNA: ENSMUST00000110658.7

Tubgcp4-203, Transcript of Gamma-tubulin complex component 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Tubgcp4, Length 4,250 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-203ENSMUST00000110658 Lce1eQ9D139 143 aa5.18□□□□□ -1.58
Tubgcp4-203ENSMUST00000110658 Mt4P47945 62 aa5.15□□□□□ -1.59
Tubgcp4-203ENSMUST00000110658 Gm11562A0PK51 136 aa5.13□□□□□ -1.59
Tubgcp4-203ENSMUST00000110658 SspoQ8CG65 4998 aa5.11□□□□□ -1.59
Tubgcp4-203ENSMUST00000110658 Fsip2A2ARZ3 6995 aa5.08□□□□□ -1.6
Tubgcp4-203ENSMUST00000110658 Gm10024A0A0A0MQA4 119 aa5.02□□□□□ -1.61
Tubgcp4-203ENSMUST00000110658 Krtap4-1Q3UUY3 169 aa5.01□□□□□ -1.61
Tubgcp4-203ENSMUST00000110658 Krtap4-2B1AQ85 167 aa5□□□□□ -1.61
Tubgcp4-203ENSMUST00000110658 Krtap31-1Q9D644 177 aa4.92□□□□□ -1.62
Tubgcp4-203ENSMUST00000110658 Sprr2hO70559 108 aa4.92□□□□□ -1.62
Tubgcp4-203ENSMUST00000110658 Sprr2fO70557 76 aa4.88□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Krtap4-9B1AQA9 244 aa4.86□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Gm11564A2A4L9 201 aa4.86□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Gm11563B1AQ90 168 aa4.86□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Gm11595B1AQA7 289 aa4.86□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Krtap4-8B1AQA8 209 aa4.86□□□□□ -1.63
Tubgcp4-203ENSMUST00000110658 Gm11596B1AQB0 205 aa4.82□□□□□ -1.64
Tubgcp4-203ENSMUST00000110658 Sprr2eO70556 76 aa4.82□□□□□ -1.64
Tubgcp4-203ENSMUST00000110658 Lce1a1Q9CQH5 143 aa4.81□□□□□ -1.64
Tubgcp4-203ENSMUST00000110658 2300003K06RikA2A4M0 262 aa4.81□□□□□ -1.64
Tubgcp4-203ENSMUST00000110658 Syne2Q6ZWQ0 6874 aaKnown RBP4.77□□□□□ -1.65
Tubgcp4-203ENSMUST00000110658 ObscnA2AAJ9 8891 aaKnown RBP4.75□□□□□ -1.65
Tubgcp4-203ENSMUST00000110658 Lce1kJ3QP15 125 aa4.75□□□□□ -1.65
Tubgcp4-203ENSMUST00000110658 Krtap4-13Q9D7P3 165 aa4.72□□□□□ -1.65
Tubgcp4-203ENSMUST00000110658 Krtap4-7Q9D732 168 aa4.69□□□□□ -1.66
Tubgcp4-203ENSMUST00000110658 Krtap4-16Q91W93 202 aa4.66□□□□□ -1.66
Tubgcp4-203ENSMUST00000110658 Macf1Q9QXZ0 7354 aaKnown RBP4.47□□□□□ -1.69
Tubgcp4-203ENSMUST00000110658 Mt1P02802 61 aaKnown RBP4.41□□□□□ -1.7
Tubgcp4-203ENSMUST00000110658 Mt3P28184 68 aa4.4□□□□□ -1.71
Tubgcp4-203ENSMUST00000110658 A0A1Y7VJH8 109 aa4.29□□□□□ -1.72
Tubgcp4-203ENSMUST00000110658 Krtap20-2E9Q0A8 60 aa4.26□□□□□ -1.73
Tubgcp4-203ENSMUST00000110658 Krtap28-10A0A1Y7VP58 119 aa4.25□□□□□ -1.73
Tubgcp4-203ENSMUST00000110658 Gm11555B1AQ89 175 aa4.24□□□□□ -1.73
Tubgcp4-203ENSMUST00000110658 A0A1Y7VLE6 161 aa4.14□□□□□ -1.75
Tubgcp4-203ENSMUST00000110658 Krtap6-3A0A087WQL6 57 aa4.12□□□□□ -1.75
Tubgcp4-203ENSMUST00000110658 Gm11554B1AQB2 190 aa4.09□□□□□ -1.75
Tubgcp4-203ENSMUST00000110658 Muc19Q6PZE0 7524 aa4.07□□□□□ -1.76
Tubgcp4-203ENSMUST00000110658 A030005L19RikA0A1Y7VIU2 113 aa4.04□□□□□ -1.76
Tubgcp4-203ENSMUST00000110658 Krtap28-13A0A087WQP5 138 aa3.99□□□□□ -1.77
Tubgcp4-203ENSMUST00000110658 A030005K14RikA0A1Y7VNY1 122 aa3.9□□□□□ -1.78
Tubgcp4-203ENSMUST00000110658 DstQ91ZU6 7393 aaKnown RBP3.9□□□□□ -1.79
Tubgcp4-203ENSMUST00000110658 Gm7544A0A1Y7VJ58 118 aa3.88□□□□□ -1.79
Tubgcp4-203ENSMUST00000110658 Kmt2dQ6PDK2 5588 aa3.85□□□□□ -1.79
Tubgcp4-203ENSMUST00000110658 NebE9Q1W3 7152 aa3.81□□□□□ -1.8
Tubgcp4-203ENSMUST00000110658 Gm11568A2A4M2 211 aa3.78□□□□□ -1.8
Tubgcp4-203ENSMUST00000110658 Krtap9-1Q64526 186 aa3.78□□□□□ -1.8
Tubgcp4-203ENSMUST00000110658 Sprr2bO70554 98 aa3.66□□□□□ -1.82
Tubgcp4-203ENSMUST00000110658 A030003K21RikA0A1Y7VIM3 128 aa3.6□□□□□ -1.83
Tubgcp4-203ENSMUST00000110658 1110025L11RikO09048 78 aa3.59□□□□□ -1.83
Tubgcp4-203ENSMUST00000110658 Krtap6-5Q925H3 78 aa3.59□□□□□ -1.83
Tubgcp4-203ENSMUST00000110658 A0A1Y7VJ07 166 aa3.53□□□□□ -1.85
Tubgcp4-203ENSMUST00000110658 Gm6217A0A1Y7VJK9 128 aa3.48□□□□□ -1.85
Tubgcp4-203ENSMUST00000110658 Gm11559Q9D3H7 191 aa3.46□□□□□ -1.86
Tubgcp4-203ENSMUST00000110658 Hmcn1D3YXG0 5634 aa3.46□□□□□ -1.86
Tubgcp4-203ENSMUST00000110658 Krtap5-2Q9D5Z7 189 aa3.44□□□□□ -1.86
Tubgcp4-203ENSMUST00000110658 A030014E15RikA0A1Y7VJV2 120 aa3.32□□□□□ -1.88
Tubgcp4-203ENSMUST00000110658 Eppk1Q8R0W0 6548 aa3.31□□□□□ -1.88
Tubgcp4-203ENSMUST00000110658 Gm10229O08631 77 aa3.28□□□□□ -1.88
Tubgcp4-203ENSMUST00000110658 Gpr98Q8VHN7 6298 aaKnown RBP3.21□□□□□ -1.9
Tubgcp4-203ENSMUST00000110658 Gm11639A0A1D5RLM8 5808 aa3.2□□□□□ -1.9
Tubgcp4-203ENSMUST00000110658 Gm4553A0A1B0GSA9 284 aa3.18□□□□□ -1.9
Tubgcp4-203ENSMUST00000110658 Gm10153A0A1B0GRL1 320 aa3.17□□□□□ -1.9
Tubgcp4-203ENSMUST00000110658 Krtap31-2Q8CAY5 177 aa3.16□□□□□ -1.9
Tubgcp4-203ENSMUST00000110658 Phgr1Q8K0G7 91 aa3.09□□□□□ -1.91
Tubgcp4-203ENSMUST00000110658 Gm2431E9Q8S1 172 aa3.04□□□□□ -1.92
Tubgcp4-203ENSMUST00000110658 Gm45337A0A1B0GS71 263 aa2.94□□□□□ -1.94
Tubgcp4-203ENSMUST00000110658 AhnakE9Q616 5656 aaKnown RBP2.94□□□□□ -1.94
Tubgcp4-203ENSMUST00000110658 Gm40460A0A1B0GR10 244 aa2.87□□□□□ -1.95
Tubgcp4-203ENSMUST00000110658 Gm7579A0A1B0GRJ4 243 aa2.87□□□□□ -1.95
Tubgcp4-203ENSMUST00000110658 Krtap5-5Q2TA51 241 aa2.87□□□□□ -1.95
Tubgcp4-203ENSMUST00000110658 Krtap5-4Q62220 223 aa2.87□□□□□ -1.95
Tubgcp4-203ENSMUST00000110658 A0A286YCP9 139 aa2.82□□□□□ -1.96
Tubgcp4-203ENSMUST00000110658 Krtap21-1Q925H4 128 aa2.72□□□□□ -1.97
Tubgcp4-203ENSMUST00000110658 Krtap6-2O08884 159 aa2.71□□□□□ -1.98
Tubgcp4-203ENSMUST00000110658 Gm39115A0A1B0GSH7 232 aa2.6□□□□□ -1.99
Tubgcp4-203ENSMUST00000110658 Gm11567Q9D141 195 aa2.51□□□□□ -2.01
Tubgcp4-203ENSMUST00000110658 Gm29735A0A1B0GT06 219 aa2.17□□□□□ -2.06
Tubgcp4-203ENSMUST00000110658 Gm45618A0A1B0GSA0 219 aa2.14□□□□□ -2.07
Tubgcp4-203ENSMUST00000110658 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Tubgcp4-203ENSMUST00000110658 Gm4559A4IF42 199 aa1.28□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 125 ms