RNA–Protein interactions for RNA: ENSMUST00000110657.1

Tubgcp4-202, Transcript of Gamma-tubulin complex component 4, mousemouse

TSL 1 (best) BASIC

Gene Tubgcp4, Length 1,992 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-202ENSMUST00000110657 Krtap4-6Q3V4B7 195 aa4.83□□□□□ -1.64
Tubgcp4-202ENSMUST00000110657 Krtap4-2B1AQ85 167 aa4.82□□□□□ -1.64
Tubgcp4-202ENSMUST00000110657 Lce3dE9Q8V1 98 aa4.81□□□□□ -1.64
Tubgcp4-202ENSMUST00000110657 Sprr2fO70557 76 aa4.77□□□□□ -1.65
Tubgcp4-202ENSMUST00000110657 Syne1Q6ZWR6 8799 aa4.73□□□□□ -1.65
Tubgcp4-202ENSMUST00000110657 Lce3eF8VQJ0 98 aa4.73□□□□□ -1.65
Tubgcp4-202ENSMUST00000110657 Lce3fQ6PAI4 98 aa4.73□□□□□ -1.65
Tubgcp4-202ENSMUST00000110657 Gm11596B1AQB0 205 aa4.71□□□□□ -1.66
Tubgcp4-202ENSMUST00000110657 Syne2Q6ZWQ0 6874 aaKnown RBP4.7□□□□□ -1.66
Tubgcp4-202ENSMUST00000110657 Lce3aQ497I5 98 aa4.65□□□□□ -1.67
Tubgcp4-202ENSMUST00000110657 2300003K06RikA2A4M0 262 aa4.62□□□□□ -1.67
Tubgcp4-202ENSMUST00000110657 Gm11564A2A4L9 201 aa4.59□□□□□ -1.67
Tubgcp4-202ENSMUST00000110657 Gm11595B1AQA7 289 aa4.59□□□□□ -1.67
Tubgcp4-202ENSMUST00000110657 Krtap4-8B1AQA8 209 aa4.59□□□□□ -1.67
Tubgcp4-202ENSMUST00000110657 Krtap31-1Q9D644 177 aa4.53□□□□□ -1.68
Tubgcp4-202ENSMUST00000110657 Krtap4-9B1AQA9 244 aa4.48□□□□□ -1.69
Tubgcp4-202ENSMUST00000110657 Mt4P47945 62 aa4.48□□□□□ -1.69
Tubgcp4-202ENSMUST00000110657 ObscnA2AAJ9 8891 aaKnown RBP4.48□□□□□ -1.69
Tubgcp4-202ENSMUST00000110657 Fsip2A2ARZ3 6995 aa4.45□□□□□ -1.7
Tubgcp4-202ENSMUST00000110657 Lce1bQ9D149 137 aa4.44□□□□□ -1.7
Tubgcp4-202ENSMUST00000110657 Mt1P02802 61 aaKnown RBP4.37□□□□□ -1.71
Tubgcp4-202ENSMUST00000110657 Gm38119A0A0A6YX29 146 aa4.36□□□□□ -1.71
Tubgcp4-202ENSMUST00000110657 Krtap4-13Q9D7P3 165 aa4.32□□□□□ -1.72
Tubgcp4-202ENSMUST00000110657 Lce1lQ9D1G7 135 aa4.27□□□□□ -1.73
Tubgcp4-202ENSMUST00000110657 Lce1kJ3QP15 125 aa4.16□□□□□ -1.74
Tubgcp4-202ENSMUST00000110657 Krtap4-16Q91W93 202 aa4.16□□□□□ -1.74
Tubgcp4-202ENSMUST00000110657 Gm10024A0A0A0MQA4 119 aa4.08□□□□□ -1.76
Tubgcp4-202ENSMUST00000110657 A0A1Y7VJH8 109 aa4.07□□□□□ -1.76
Tubgcp4-202ENSMUST00000110657 Gm11568A2A4M2 211 aa4.06□□□□□ -1.76
Tubgcp4-202ENSMUST00000110657 Krtap9-1Q64526 186 aa4.06□□□□□ -1.76
Tubgcp4-202ENSMUST00000110657 Krtap6-3A0A087WQL6 57 aa4.05□□□□□ -1.76
Tubgcp4-202ENSMUST00000110657 Krtap5-2Q9D5Z7 189 aa3.97□□□□□ -1.77
Tubgcp4-202ENSMUST00000110657 Krtap20-2E9Q0A8 60 aa3.93□□□□□ -1.78
Tubgcp4-202ENSMUST00000110657 Gm10153A0A1B0GRL1 320 aa3.91□□□□□ -1.78
Tubgcp4-202ENSMUST00000110657 Mt3P28184 68 aa3.88□□□□□ -1.79
Tubgcp4-202ENSMUST00000110657 A0A1Y7VLE6 161 aa3.86□□□□□ -1.79
Tubgcp4-202ENSMUST00000110657 Krtap31-2Q8CAY5 177 aa3.72□□□□□ -1.81
Tubgcp4-202ENSMUST00000110657 Krtap28-13A0A087WQP5 138 aa3.66□□□□□ -1.82
Tubgcp4-202ENSMUST00000110657 A030005K14RikA0A1Y7VNY1 122 aa3.65□□□□□ -1.82
Tubgcp4-202ENSMUST00000110657 Gm45337A0A1B0GS71 263 aa3.64□□□□□ -1.83
Tubgcp4-202ENSMUST00000110657 Macf1Q9QXZ0 7354 aaKnown RBP3.62□□□□□ -1.83
Tubgcp4-202ENSMUST00000110657 Gm4553A0A1B0GSA9 284 aa3.62□□□□□ -1.83
Tubgcp4-202ENSMUST00000110657 Gm11559Q9D3H7 191 aa3.62□□□□□ -1.83
Tubgcp4-202ENSMUST00000110657 Krtap28-10A0A1Y7VP58 119 aa3.6□□□□□ -1.83
Tubgcp4-202ENSMUST00000110657 Gm40460A0A1B0GR10 244 aa3.56□□□□□ -1.84
Tubgcp4-202ENSMUST00000110657 Gm7579A0A1B0GRJ4 243 aa3.56□□□□□ -1.84
Tubgcp4-202ENSMUST00000110657 Krtap5-5Q2TA51 241 aa3.56□□□□□ -1.84
Tubgcp4-202ENSMUST00000110657 Krtap5-4Q62220 223 aa3.56□□□□□ -1.84
Tubgcp4-202ENSMUST00000110657 Gm2431E9Q8S1 172 aa3.52□□□□□ -1.85
Tubgcp4-202ENSMUST00000110657 Hmcn1D3YXG0 5634 aa3.51□□□□□ -1.85
Tubgcp4-202ENSMUST00000110657 Gm11554B1AQB2 190 aa3.5□□□□□ -1.85
Tubgcp4-202ENSMUST00000110657 Sprr2bO70554 98 aa3.44□□□□□ -1.86
Tubgcp4-202ENSMUST00000110657 Kmt2dQ6PDK2 5588 aa3.44□□□□□ -1.86
Tubgcp4-202ENSMUST00000110657 1110025L11RikO09048 78 aa3.43□□□□□ -1.86
Tubgcp4-202ENSMUST00000110657 Krtap6-5Q925H3 78 aa3.43□□□□□ -1.86
Tubgcp4-202ENSMUST00000110657 Muc16A0A140LJ72 8478 aa3.39□□□□□ -1.87
Tubgcp4-202ENSMUST00000110657 A0A1Y7VJ07 166 aa3.36□□□□□ -1.87
Tubgcp4-202ENSMUST00000110657 A030014E15RikA0A1Y7VJV2 120 aa3.36□□□□□ -1.87
Tubgcp4-202ENSMUST00000110657 A030005L19RikA0A1Y7VIU2 113 aa3.34□□□□□ -1.88
Tubgcp4-202ENSMUST00000110657 Gm7544A0A1Y7VJ58 118 aa3.27□□□□□ -1.89
Tubgcp4-202ENSMUST00000110657 Gm39115A0A1B0GSH7 232 aa3.25□□□□□ -1.89
Tubgcp4-202ENSMUST00000110657 Eppk1Q8R0W0 6548 aa3.21□□□□□ -1.9
Tubgcp4-202ENSMUST00000110657 DstQ91ZU6 7393 aaKnown RBP3.14□□□□□ -1.91
Tubgcp4-202ENSMUST00000110657 Muc19Q6PZE0 7524 aa3.13□□□□□ -1.91
Tubgcp4-202ENSMUST00000110657 Gm11639A0A1D5RLM8 5808 aa3.12□□□□□ -1.91
Tubgcp4-202ENSMUST00000110657 Gm10229O08631 77 aa3.03□□□□□ -1.92
Tubgcp4-202ENSMUST00000110657 AhnakE9Q616 5656 aaKnown RBP2.96□□□□□ -1.94
Tubgcp4-202ENSMUST00000110657 Gpr98Q8VHN7 6298 aaKnown RBP2.88□□□□□ -1.95
Tubgcp4-202ENSMUST00000110657 NebE9Q1W3 7152 aa2.87□□□□□ -1.95
Tubgcp4-202ENSMUST00000110657 Gm45618A0A1B0GSA0 219 aa2.87□□□□□ -1.95
Tubgcp4-202ENSMUST00000110657 Phgr1Q8K0G7 91 aa2.85□□□□□ -1.95
Tubgcp4-202ENSMUST00000110657 Krtap21-1Q925H4 128 aa2.83□□□□□ -1.96
Tubgcp4-202ENSMUST00000110657 A0A286YCP9 139 aa2.78□□□□□ -1.97
Tubgcp4-202ENSMUST00000110657 Gm11567Q9D141 195 aa2.75□□□□□ -1.97
Tubgcp4-202ENSMUST00000110657 Gm29735A0A1B0GT06 219 aa2.73□□□□□ -1.97
Tubgcp4-202ENSMUST00000110657 A030003K21RikA0A1Y7VIM3 128 aa2.64□□□□□ -1.99
Tubgcp4-202ENSMUST00000110657 Gm6217A0A1Y7VJK9 128 aa2.55□□□□□ -2
Tubgcp4-202ENSMUST00000110657 Krtap6-2O08884 159 aa2.5□□□□□ -2.01
Tubgcp4-202ENSMUST00000110657 Krtap5-1Q64507 230 aa1.69□□□□□ -2.14
Tubgcp4-202ENSMUST00000110657 Gm4559A4IF42 199 aa1.55□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 132.7 ms