RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Krtap4-2B1AQ85 167 aa5.16□□□□□ -1.58
Col4a3bp-202ENSMUST00000109444 ZanO88799 5376 aa5.15□□□□□ -1.59
Col4a3bp-202ENSMUST00000109444 Fat4Q2PZL6 4981 aa5.13□□□□□ -1.59
Col4a3bp-202ENSMUST00000109444 Krtap4-6Q3V4B7 195 aa5.07□□□□□ -1.6
Col4a3bp-202ENSMUST00000109444 Krtap4-1Q3UUY3 169 aa5.06□□□□□ -1.6
Col4a3bp-202ENSMUST00000109444 Rnf213E9Q555 5152 aaKnown RBP5.02□□□□□ -1.61
Col4a3bp-202ENSMUST00000109444 Krtap17-1A2A5X6 109 aa4.98□□□□□ -1.61
Col4a3bp-202ENSMUST00000109444 Ush2AQ2QI47 5193 aa4.96□□□□□ -1.62
Col4a3bp-202ENSMUST00000109444 Muc5bE9Q5I3 4800 aa4.93□□□□□ -1.62
Col4a3bp-202ENSMUST00000109444 Mt3P28184 68 aa4.86□□□□□ -1.63
Col4a3bp-202ENSMUST00000109444 2300003K06RikA2A4M0 262 aa4.82□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Lce1kJ3QP15 125 aa4.81□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Gm11596B1AQB0 205 aa4.8□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Gm11564A2A4L9 201 aa4.79□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Gm11563B1AQ90 168 aa4.79□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Gm11595B1AQA7 289 aa4.79□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Krtap4-8B1AQA8 209 aa4.79□□□□□ -1.64
Col4a3bp-202ENSMUST00000109444 Mt1P02802 61 aaKnown RBP4.77□□□□□ -1.65
Col4a3bp-202ENSMUST00000109444 Krtap4-9B1AQA9 244 aa4.74□□□□□ -1.65
Col4a3bp-202ENSMUST00000109444 Krtap4-7Q9D732 168 aa4.74□□□□□ -1.65
Col4a3bp-202ENSMUST00000109444 Krtap4-16Q91W93 202 aa4.74□□□□□ -1.65
Col4a3bp-202ENSMUST00000109444 Fsip2A2ARZ3 6995 aa4.65□□□□□ -1.67
Col4a3bp-202ENSMUST00000109444 SspoQ8CG65 4998 aa4.65□□□□□ -1.67
Col4a3bp-202ENSMUST00000109444 Lce1a1Q9CQH5 143 aa4.61□□□□□ -1.67
Col4a3bp-202ENSMUST00000109444 Syne2Q6ZWQ0 6874 aaKnown RBP4.59□□□□□ -1.67
Col4a3bp-202ENSMUST00000109444 Krtap4-13Q9D7P3 165 aa4.59□□□□□ -1.68
Col4a3bp-202ENSMUST00000109444 Sprr2bO70554 98 aa4.44□□□□□ -1.7
Col4a3bp-202ENSMUST00000109444 Gm11555B1AQ89 175 aa4.38□□□□□ -1.71
Col4a3bp-202ENSMUST00000109444 Krtap31-2Q8CAY5 177 aa4.36□□□□□ -1.71
Col4a3bp-202ENSMUST00000109444 Muc16A0A140LJ72 8478 aa4.35□□□□□ -1.71
Col4a3bp-202ENSMUST00000109444 ObscnA2AAJ9 8891 aaKnown RBP4.34□□□□□ -1.71
Col4a3bp-202ENSMUST00000109444 Krtap6-3A0A087WQL6 57 aa4.33□□□□□ -1.72
Col4a3bp-202ENSMUST00000109444 A0A1Y7VLE6 161 aa4.29□□□□□ -1.72
Col4a3bp-202ENSMUST00000109444 Macf1Q9QXZ0 7354 aaKnown RBP4.14□□□□□ -1.75
Col4a3bp-202ENSMUST00000109444 Krtap20-2E9Q0A8 60 aa4.13□□□□□ -1.75
Col4a3bp-202ENSMUST00000109444 Eppk1Q8R0W0 6548 aa4.12□□□□□ -1.75
Col4a3bp-202ENSMUST00000109444 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Col4a3bp-202ENSMUST00000109444 A030003K21RikA0A1Y7VIM3 128 aa4□□□□□ -1.77
Col4a3bp-202ENSMUST00000109444 A0A1Y7VJH8 109 aa3.94□□□□□ -1.78
Col4a3bp-202ENSMUST00000109444 A030005K14RikA0A1Y7VNY1 122 aa3.86□□□□□ -1.79
Col4a3bp-202ENSMUST00000109444 Krtap28-10A0A1Y7VP58 119 aa3.85□□□□□ -1.79
Col4a3bp-202ENSMUST00000109444 Krtap28-13A0A087WQP5 138 aa3.84□□□□□ -1.79
Col4a3bp-202ENSMUST00000109444 DstQ91ZU6 7393 aaKnown RBP3.82□□□□□ -1.8
Col4a3bp-202ENSMUST00000109444 1110025L11RikO09048 78 aa3.82□□□□□ -1.8
Col4a3bp-202ENSMUST00000109444 Krtap6-5Q925H3 78 aa3.82□□□□□ -1.8
Col4a3bp-202ENSMUST00000109444 A0A1Y7VJ07 166 aa3.81□□□□□ -1.8
Col4a3bp-202ENSMUST00000109444 Gm6217A0A1Y7VJK9 128 aa3.78□□□□□ -1.8
Col4a3bp-202ENSMUST00000109444 NebE9Q1W3 7152 aa3.73□□□□□ -1.81
Col4a3bp-202ENSMUST00000109444 Kmt2dQ6PDK2 5588 aa3.69□□□□□ -1.82
Col4a3bp-202ENSMUST00000109444 Gm7544A0A1Y7VJ58 118 aa3.64□□□□□ -1.83
Col4a3bp-202ENSMUST00000109444 Gm10229O08631 77 aa3.57□□□□□ -1.84
Col4a3bp-202ENSMUST00000109444 A030014E15RikA0A1Y7VJV2 120 aa3.51□□□□□ -1.85
Col4a3bp-202ENSMUST00000109444 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Col4a3bp-202ENSMUST00000109444 Gm11568A2A4M2 211 aa3.48□□□□□ -1.85
Col4a3bp-202ENSMUST00000109444 Krtap9-1Q64526 186 aa3.48□□□□□ -1.85
Col4a3bp-202ENSMUST00000109444 Muc19Q6PZE0 7524 aa3.41□□□□□ -1.86
Col4a3bp-202ENSMUST00000109444 Gm11559Q9D3H7 191 aa3.38□□□□□ -1.87
Col4a3bp-202ENSMUST00000109444 Gpr98Q8VHN7 6298 aaKnown RBP3.35□□□□□ -1.87
Col4a3bp-202ENSMUST00000109444 Phgr1Q8K0G7 91 aa3.35□□□□□ -1.87
Col4a3bp-202ENSMUST00000109444 Gm11639A0A1D5RLM8 5808 aa3.28□□□□□ -1.88
Col4a3bp-202ENSMUST00000109444 Krtap5-2Q9D5Z7 189 aa3.21□□□□□ -1.9
Col4a3bp-202ENSMUST00000109444 Hmcn1D3YXG0 5634 aa3.02□□□□□ -1.93
Col4a3bp-202ENSMUST00000109444 Gm4553A0A1B0GSA9 284 aa2.98□□□□□ -1.93
Col4a3bp-202ENSMUST00000109444 A0A286YCP9 139 aa2.97□□□□□ -1.93
Col4a3bp-202ENSMUST00000109444 Krtap6-2O08884 159 aa2.85□□□□□ -1.95
Col4a3bp-202ENSMUST00000109444 Gm10153A0A1B0GRL1 320 aa2.82□□□□□ -1.96
Col4a3bp-202ENSMUST00000109444 Krtap21-1Q925H4 128 aa2.77□□□□□ -1.97
Col4a3bp-202ENSMUST00000109444 Gm2431E9Q8S1 172 aa2.73□□□□□ -1.97
Col4a3bp-202ENSMUST00000109444 Gm40460A0A1B0GR10 244 aa2.68□□□□□ -1.98
Col4a3bp-202ENSMUST00000109444 Gm7579A0A1B0GRJ4 243 aa2.68□□□□□ -1.98
Col4a3bp-202ENSMUST00000109444 Krtap5-5Q2TA51 241 aa2.68□□□□□ -1.98
Col4a3bp-202ENSMUST00000109444 Krtap5-4Q62220 223 aa2.68□□□□□ -1.98
Col4a3bp-202ENSMUST00000109444 Gm45337A0A1B0GS71 263 aa2.67□□□□□ -1.98
Col4a3bp-202ENSMUST00000109444 AhnakE9Q616 5656 aaKnown RBP2.65□□□□□ -1.99
Col4a3bp-202ENSMUST00000109444 Gm11567Q9D141 195 aa2.44□□□□□ -2.02
Col4a3bp-202ENSMUST00000109444 Gm39115A0A1B0GSH7 232 aa2.4□□□□□ -2.03
Col4a3bp-202ENSMUST00000109444 Gm45618A0A1B0GSA0 219 aa2.12□□□□□ -2.07
Col4a3bp-202ENSMUST00000109444 Gm29735A0A1B0GT06 219 aa2.07□□□□□ -2.08
Col4a3bp-202ENSMUST00000109444 Gm4559A4IF42 199 aa1.61□□□□□ -2.15
Col4a3bp-202ENSMUST00000109444 Krtap5-1Q64507 230 aa1.53□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 73.3 ms