RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 Muc16A0A140LJ72 8478 aa4.32□□□□□ -1.72
Col6a2-202ENSMUST00000105413 Lce1eQ9D139 143 aa4.32□□□□□ -1.72
Col6a2-202ENSMUST00000105413 Fsip2A2ARZ3 6995 aa4.3□□□□□ -1.72
Col6a2-202ENSMUST00000105413 Muc5bE9Q5I3 4800 aa4.29□□□□□ -1.72
Col6a2-202ENSMUST00000105413 Sprr2dO70555 85 aa4.28□□□□□ -1.72
Col6a2-202ENSMUST00000105413 Krtap4-1Q3UUY3 169 aa4.27□□□□□ -1.73
Col6a2-202ENSMUST00000105413 Gm11596B1AQB0 205 aa4.25□□□□□ -1.73
Col6a2-202ENSMUST00000105413 Gm11938Q9D3H4 131 aa4.25□□□□□ -1.73
Col6a2-202ENSMUST00000105413 Krtap4-9B1AQA9 244 aa4.21□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Gm11564A2A4L9 201 aa4.19□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Gm11563B1AQ90 168 aa4.19□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Gm11595B1AQA7 289 aa4.19□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Krtap4-8B1AQA8 209 aa4.19□□□□□ -1.74
Col6a2-202ENSMUST00000105413 SspoQ8CG65 4998 aa4.17□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Gm10024A0A0A0MQA4 119 aa4.15□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Gm11562A0PK51 136 aa4.15□□□□□ -1.74
Col6a2-202ENSMUST00000105413 Syne2Q6ZWQ0 6874 aaKnown RBP4.13□□□□□ -1.75
Col6a2-202ENSMUST00000105413 2300003K06RikA2A4M0 262 aa4.12□□□□□ -1.75
Col6a2-202ENSMUST00000105413 Macf1Q9QXZ0 7354 aaKnown RBP4.1□□□□□ -1.75
Col6a2-202ENSMUST00000105413 Krtap4-7Q9D732 168 aa4.1□□□□□ -1.75
Col6a2-202ENSMUST00000105413 Krtap4-13Q9D7P3 165 aa4.08□□□□□ -1.76
Col6a2-202ENSMUST00000105413 Krtap31-1Q9D644 177 aa3.99□□□□□ -1.77
Col6a2-202ENSMUST00000105413 Sprr2hO70559 108 aa3.97□□□□□ -1.77
Col6a2-202ENSMUST00000105413 ObscnA2AAJ9 8891 aaKnown RBP3.96□□□□□ -1.78
Col6a2-202ENSMUST00000105413 Lce1kJ3QP15 125 aa3.9□□□□□ -1.78
Col6a2-202ENSMUST00000105413 DstQ91ZU6 7393 aaKnown RBP3.89□□□□□ -1.79
Col6a2-202ENSMUST00000105413 Lce1a1Q9CQH5 143 aa3.85□□□□□ -1.79
Col6a2-202ENSMUST00000105413 Krtap6-3A0A087WQL6 57 aa3.77□□□□□ -1.81
Col6a2-202ENSMUST00000105413 Krtap4-16Q91W93 202 aa3.76□□□□□ -1.81
Col6a2-202ENSMUST00000105413 Gm11554B1AQB2 190 aa3.68□□□□□ -1.82
Col6a2-202ENSMUST00000105413 Mt3P28184 68 aa3.67□□□□□ -1.82
Col6a2-202ENSMUST00000105413 NebE9Q1W3 7152 aa3.66□□□□□ -1.82
Col6a2-202ENSMUST00000105413 Mt1P02802 61 aaKnown RBP3.61□□□□□ -1.83
Col6a2-202ENSMUST00000105413 Eppk1Q8R0W0 6548 aa3.56□□□□□ -1.84
Col6a2-202ENSMUST00000105413 Krtap20-2E9Q0A8 60 aa3.53□□□□□ -1.84
Col6a2-202ENSMUST00000105413 Gm11555B1AQ89 175 aa3.52□□□□□ -1.85
Col6a2-202ENSMUST00000105413 Kmt2dQ6PDK2 5588 aa3.43□□□□□ -1.86
Col6a2-202ENSMUST00000105413 Muc19Q6PZE0 7524 aa3.41□□□□□ -1.86
Col6a2-202ENSMUST00000105413 Sprr2bO70554 98 aa3.37□□□□□ -1.87
Col6a2-202ENSMUST00000105413 Krtap31-2Q8CAY5 177 aa3.18□□□□□ -1.9
Col6a2-202ENSMUST00000105413 Gpr98Q8VHN7 6298 aaKnown RBP3.17□□□□□ -1.9
Col6a2-202ENSMUST00000105413 Gm11568A2A4M2 211 aa3.08□□□□□ -1.92
Col6a2-202ENSMUST00000105413 Krtap9-1Q64526 186 aa3.08□□□□□ -1.92
Col6a2-202ENSMUST00000105413 Gm11639A0A1D5RLM8 5808 aa3□□□□□ -1.93
Col6a2-202ENSMUST00000105413 1110025L11RikO09048 78 aa2.93□□□□□ -1.94
Col6a2-202ENSMUST00000105413 Krtap6-5Q925H3 78 aa2.93□□□□□ -1.94
Col6a2-202ENSMUST00000105413 Gm11559Q9D3H7 191 aa2.88□□□□□ -1.95
Col6a2-202ENSMUST00000105413 Krtap5-2Q9D5Z7 189 aa2.84□□□□□ -1.96
Col6a2-202ENSMUST00000105413 Hmcn1D3YXG0 5634 aa2.77□□□□□ -1.97
Col6a2-202ENSMUST00000105413 Gm10229O08631 77 aa2.69□□□□□ -1.98
Col6a2-202ENSMUST00000105413 Gm4553A0A1B0GSA9 284 aa2.63□□□□□ -1.99
Col6a2-202ENSMUST00000105413 Gm10153A0A1B0GRL1 320 aa2.59□□□□□ -2
Col6a2-202ENSMUST00000105413 Phgr1Q8K0G7 91 aa2.51□□□□□ -2.01
Col6a2-202ENSMUST00000105413 Gm2431E9Q8S1 172 aa2.51□□□□□ -2.01
Col6a2-202ENSMUST00000105413 A0A1Y7VJH8 109 aa2.5□□□□□ -2.01
Col6a2-202ENSMUST00000105413 Gm45337A0A1B0GS71 263 aa2.42□□□□□ -2.02
Col6a2-202ENSMUST00000105413 Gm40460A0A1B0GR10 244 aa2.36□□□□□ -2.03
Col6a2-202ENSMUST00000105413 Gm7579A0A1B0GRJ4 243 aa2.36□□□□□ -2.03
Col6a2-202ENSMUST00000105413 Krtap5-5Q2TA51 241 aa2.36□□□□□ -2.03
Col6a2-202ENSMUST00000105413 Krtap5-4Q62220 223 aa2.36□□□□□ -2.03
Col6a2-202ENSMUST00000105413 AhnakE9Q616 5656 aaKnown RBP2.35□□□□□ -2.03
Col6a2-202ENSMUST00000105413 A030005L19RikA0A1Y7VIU2 113 aa2.3□□□□□ -2.04
Col6a2-202ENSMUST00000105413 Krtap6-2O08884 159 aa2.21□□□□□ -2.06
Col6a2-202ENSMUST00000105413 Krtap21-1Q925H4 128 aa2.2□□□□□ -2.06
Col6a2-202ENSMUST00000105413 A0A1Y7VLE6 161 aa2.18□□□□□ -2.06
Col6a2-202ENSMUST00000105413 Gm39115A0A1B0GSH7 232 aa2.15□□□□□ -2.06
Col6a2-202ENSMUST00000105413 Gm11567Q9D141 195 aa2.03□□□□□ -2.08
Col6a2-202ENSMUST00000105413 A030003K21RikA0A1Y7VIM3 128 aa1.81□□□□□ -2.12
Col6a2-202ENSMUST00000105413 Krtap28-10A0A1Y7VP58 119 aa1.8□□□□□ -2.12
Col6a2-202ENSMUST00000105413 Gm45618A0A1B0GSA0 219 aa1.79□□□□□ -2.12
Col6a2-202ENSMUST00000105413 Gm29735A0A1B0GT06 219 aa1.79□□□□□ -2.12
Col6a2-202ENSMUST00000105413 Gm7544A0A1Y7VJ58 118 aa1.72□□□□□ -2.13
Col6a2-202ENSMUST00000105413 Krtap28-13A0A087WQP5 138 aa1.69□□□□□ -2.14
Col6a2-202ENSMUST00000105413 Gm6217A0A1Y7VJK9 128 aa1.67□□□□□ -2.14
Col6a2-202ENSMUST00000105413 A030005K14RikA0A1Y7VNY1 122 aa1.67□□□□□ -2.14
Col6a2-202ENSMUST00000105413 A0A1Y7VJ07 166 aa1.57□□□□□ -2.16
Col6a2-202ENSMUST00000105413 A030014E15RikA0A1Y7VJV2 120 aa1.42□□□□□ -2.18
Col6a2-202ENSMUST00000105413 Krtap5-1Q64507 230 aa1.29□□□□□ -2.2
Col6a2-202ENSMUST00000105413 A0A286YCP9 139 aa1.25□□□□□ -2.21
Col6a2-202ENSMUST00000105413 Gm4559A4IF42 199 aa0.96□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 12.9 ms